Capra hircus (goat): 108633195
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Entry
108633195 CDS
T02910
Name
(RefSeq) collagen alpha-6(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
chx
Capra hircus (goat)
Pathway
chx04151
PI3K-Akt signaling pathway
chx04382
Cornified envelope formation
chx04510
Focal adhesion
chx04512
ECM-receptor interaction
chx04518
Integrin signaling
chx04820
Cytoskeleton in muscle cells
chx04926
Relaxin signaling pathway
chx04933
AGE-RAGE signaling pathway in diabetic complications
chx04974
Protein digestion and absorption
chx05146
Amoebiasis
chx05165
Human papillomavirus infection
chx05200
Pathways in cancer
chx05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
108633195
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108633195
04518 Integrin signaling
108633195
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
108633195
09142 Cell motility
04820 Cytoskeleton in muscle cells
108633195
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
108633195
09154 Digestive system
04974 Protein digestion and absorption
108633195
09158 Development and regeneration
04382 Cornified envelope formation
108633195
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108633195
09162 Cancer: specific types
05222 Small cell lung cancer
108633195
09172 Infectious disease: viral
05165 Human papillomavirus infection
108633195
09174 Infectious disease: parasitic
05146 Amoebiasis
108633195
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
108633195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chx04147
]
108633195
00536 Glycosaminoglycan binding proteins [BR:
chx00536
]
108633195
Exosome [BR:
chx04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108633195
Glycosaminoglycan binding proteins [BR:
chx00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108633195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
108633195
NCBI-ProteinID:
XP_017900009
LinkDB
All DBs
Position
Unknown
AA seq
918 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKKPYGKPCGGQDCSGGCKCSPEKGARGRPGPIGIQGP
TGPQGLPGPSGLSGLKGDRGSPGPLGPHGPKGDKGPMGVPGFLGISGIPGHPGQPGPRGP
PGLDGCNGTQGAVGFPGPDGYSGLPGLPGLPGQKGSKGEPALAQGSFKGMKGEPGLPGLD
GITGPQGTPGSPGAVGPVGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPQGFPGVSGPPGLPGFGIAGEKGEKGIPGLPGPRG
PMGLEGVQGPPGSQGRKGSSGFPGLNGFPGIKGEKGGIGLPGPDIFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGLPGPPGAPGLPALPGGPGALGTQGALGLKGQRGNPGRTTTGAA
GLPGRDGLPGLPGPPGPPGAASETGTLQSTEPGSPGLRGERGPKGHPGLKGIKGDPGFCA
CDGGVPNMGPPGEPGLPGPPGLLGLPGLKGTKGDPGSGGAQGPSGDPGVFGPRGPTGPKG
KKGDPTLSTGSGMPGDRGDPGPQGLPGETGAPGKDGIPGLPGLPGLLGDGAQGFPGEKGL
PGLPGEKGHTGPTGPPGIGLPGAPGPRGLPGDKGVDGLPGQPGPRGVPGDCCCKEEVGKK
DLDTEGGITLPCIIPGPYGPSGLPGAPGFPGPKGARGLPGAPGQPGLRGNKGDPGSPGLV
HLPELPGFPGPHGEKGLPGFPGLPGKDGLPGKVGSPGLPGPKGAPGDILGAENGAPGEQG
LQGLPGDRGFPGDSGLPGLKGLLGKSGLLGPKGERGSPGIPGRMGQPGPPGPSGLFGIKG
KPGLRGPPGFPGISGHPGKKGPRGEIGLPASAGKRGLPGLKGLPGPPGPIGFLGNSGLPG
ATGLPGLPIGPGGPGRSE
NT seq
2755 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgcttctggttactttgtgcctgaccgaggaactggcagga
gcgggagagaagaagccctatgggaagccatgtgggggccaagactgcagtgggggctgt
aagtgctctcctgagaaaggagccagagggagaccaggaccaattggaattcaaggtcca
acaggtcctcaaggacttcctggccctagtggtttatcagggttgaaaggagacaggggc
tccccaggcccactgggaccgcatggaccaaaaggcgataagggtcccatgggtgttccc
ggctttctaggcatcagtggaattccgggccaccctggacagccaggacccagaggccca
cctggcctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tattccgggcttcctggactacctgggcttcctggtcagaaaggctctaaaggtgaacct
gcccttgcccaaggtagtttcaaaggaatgaagggggagcctgggctgcccggactggat
ggaatcactggcccacaaggaacacctggatccccaggagctgtaggacccgtaggacca
ccaggattgcaaggtcctcctggcccccctggtttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggagatgttggcctgcctggtcctgcagga
cccccaccatctactggagaactggaattcatgggatttcccaaagggaagaaaggatcc
aagggtgaaccagggcctcagggcttcccaggagtaagtggtccacctggtctgccggga
tttggaattgctggagaaaaaggagaaaagggaattcctggtttgccaggaccaaggggt
cccatgggtttagaaggagtccaaggccctccggggagtcagggcaggaaggggtcttca
ggtttccccgggcttaatggattcccaggaattaagggtgaaaaaggtggcattggcctg
ccaggcccagatattttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cctggtatgccaggcctcccaggccttaaaggagatgaaggcatacagggcctacctggc
cctcctggtgcccctggattaccggctttaccaggtggccctggtgctctgggcacccag
ggagctctaggccttaaggggcaacgaggaaaccctggccggaccacaacgggggcagct
ggtctccctggcagagatggtttgccaggcctgccaggcccaccaggcccacctggtgca
gcatctgagacgggaaccctacagagcacagaaccgggatcgccgggactccgaggggaa
cgaggtccaaaaggacacccaggcctcaaaggaattaaaggggacccaggtttttgtgct
tgtgatggtggtgtccccaacatggggccacctggggagccaggcctgcctgggccacca
ggacttctgggccttccaggtcttaaaggaaccaaaggtgatccaggctctgggggtgca
cagggcccatcaggggatccaggtgtatttgggcctcgaggtccaacaggccctaaagga
aagaaaggggacccgactctcagcacaggatcagggatgccaggagatcgaggtgatcct
ggcccccaggggctccctggtgagacaggagccccaggcaaggatggaataccaggttta
ccagggctgccaggccttctgggtgatggtgcacagggcttccccggtgaaaaggggtta
ccaggacttcctggtgaaaaaggccacactggtccaactggccccccaggaatcgggcta
ccaggggctcctggacctcgtggacttcctggagataaaggagtagatggattaccaggg
caaccaggcccccgtggagttccaggtgactgctgctgcaaggaggaggttgggaaaaaa
gacttagacacagagggaggtatcaccttgccttgtattattcctggaccatatggtcca
tcaggactcccaggagctcccggattcccaggccctaaaggggcccgtggcctccctggg
gctccaggccaacctggattgcgtggaaataaaggagaccccggaagtccaggattggtt
cacctgcctgaattgccagggtttcctggacctcatggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcctgggaaagttggcagccccggcttaccaggt
cccaagggagcccctggtgacatccttggtgctgaaaatggtgctccgggggagcaaggt
ctacagggactgcctggggacagaggatttcctggagactctggccttccaggactcaag
ggtttgcttgggaagtcgggcttgctcggccccaaaggtgagcggggcagccctggaata
ccaggccgcatgggtcagccaggccccccaggccctagtggtctatttggcatcaagggc
aaacccgggctccgcggacccccaggctttccaggcatttcaggacatcctggaaagaaa
ggtccaagaggcgagataggtctccctgcgtcagctggaaagagaggcctgcctgggctg
aaagggcttccgggaccaccagggccaattggcttcctgggaaactcaggcttgccaggg
gctactgggttgccagggctgccaattggccctggtggtcccggaagatcggaag
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