Capra hircus (goat): 108637267
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Entry
108637267 CDS
T02910
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
chx
Capra hircus (goat)
Brite
KEGG Orthology (KO) [BR:
chx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chx03000
]
108637267 (SOX1)
Transcription factors [BR:
chx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108637267 (SOX1)
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108637267
NCBI-ProteinID:
XP_017911809
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Position
12:complement(296454..297759)
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AA seq
372 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGSKANQDRVKRPMNAFMVWS
RGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYRP
RRKTKTLLKKDKYSLAGGLLAAGAGGGAAVAVGVGAAAVGQRLESPGGAAGGGYAHVNGW
ANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHAHHPHAHPHNPQPMH
RYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAGGAHQNSAVAAAAAAAAASSGALGAL
GSLVKSEPSGSPPAAAHSRAPCPGDLREMISMYLPAGEGGDPAAAQSRLHSLPPHYQGAG
AGANGTVPLTHI
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcattcgcccggcggcgcccaggcgcccacg
aacctgtcgggcccggccggggcgggcgggggcggcggcggcggcggcggcggcggcggg
ggctccaaggccaaccaggaccgggtcaagcggcccatgaatgccttcatggtgtggtcc
cgcggccagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatcagc
aagcgcctgggcgccgagtggaaggtcatgtccgaggccgagaagcggccgttcatcgac
gaggccaagcggctccgcgcgctgcacatgaaggagcacccggattacaagtaccggccg
cggcgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctgctg
gcggccggcgcgggcggcggcgcggccgtggccgtgggcgtgggcgcggcggccgtgggc
cagcggcttgagagccccggaggcgcggcgggcggcggctacgcgcacgtcaacggctgg
gccaacggcgcctaccccggctcggtggcggcggcggcggccgccgcggccatgatgcag
gaggcgcagctggcctacgggcagcacccgggcgcgggcggcgcgcacccgcacgcgcac
cccgcgcacccgcacgcgcaccacccgcacgcacacccgcacaacccgcagcccatgcac
cgctacgacatgggcgcgctgcagtacagcccgatctccaactcgcagggctacatgagc
gcctcgccctcgggctacggcggcctcccctacggcgccgcgggcggcgcgcaccagaac
tcagccgtggcggcggcggcggcggcggcggccgcgtcgtcgggcgccctgggcgcgctg
ggctcgctcgtcaagtcggagccgagcggcagcccgccggccgcggcgcactcgcgggcg
ccgtgccccggggacctgcgcgagatgattagcatgtacttgccggccggcgagggcggc
gacccggcggcggcgcagagccggctgcactcgctgccgccgcactaccagggcgcgggc
gcgggcgccaacggcacggtgcccctgacgcacatctag
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