Carboxydothermus hydrogenoformans: CHY_0006
Help
Entry
CHY_0006 CDS
T00287
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
chy
Carboxydothermus hydrogenoformans
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chy03016
]
CHY_0006 (trmE)
Transfer RNA biogenesis [BR:
chy03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
CHY_0006 (trmE)
Prokaryotic type
Methyltransferases
CHY_0006 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
GTP_EFTU
AAA_15
MMR_HSR1_Xtn
Ras
cobW
Roc
AAA_16
DUF3581
GCV_T
Motif
Other DBs
NCBI-ProteinID:
ABB15607
UniProt:
Q3AG56
LinkDB
All DBs
Position
2359..3744
Genome browser
AA seq
461 aa
AA seq
DB search
MMEDTIAAISTPLGEGGIGIVRVSGPGAIEAVKNVFIPRQSKDLSKVPSFTLHYGKIVDP
ADGKIVDEVLVSVMRAPKSYTGEDVVEINCHGGIVAVEKVLELILKQGIRLAEPGEFTKR
AFLNGRIDLSQAEAVIDIIRAKTEASLKLAGRQLSGELREKINAVRQKIINILAFIEVSI
DYPEYEFDEVTPETALKNIDEIINDVRRLLSSYERGRILREGITAVIAGKPNVGKSSLLN
ALLRKKRAIVTDIPGTTRDVIEDYLNLKGIPVKIVDTAGIRETEDLVEKLGVEKTREYLN
QADVTLFVVDVSIGIDEDDEKILSLINKDKSLLVINKIDLLQGKVNFEQYAVKTGIKNFV
PFSARNFEGLEILENKLYEILIPEQEGEGESALISNLRHKNYLEKALNSLLSAKESIASG
EPVDLVAIDLNEALRELGAITGDALGDEIINEIFSQFCVGK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagataccatcgctgccatttccacccctttgggggaaggaggcattggaatc
gtaagggttagcggtccgggcgcgattgaagctgtaaaaaatgtttttatacctcgacaa
agcaaagatttgtctaaagttccaagctttactctacattatggaaaaatcgttgaccct
gctgacggcaaaatcgttgatgaggttttggtatcggttatgcgggcccctaaaagctat
accggtgaagacgtggtagaaataaactgtcacggcggtattgtggcggtggaaaaagtt
ttagaacttattttaaaacaaggaatacgtttagccgaacccggtgaatttaccaaaagg
gcttttttaaatggacgcatcgatttatcccaggccgaagcggttatagatattatccgg
gccaagaccgaagcaagtttgaagcttgcgggacgacaactttctggcgaacttcgggaa
aaaataaatgctgtacggcaaaaaataatcaacattttggctttcattgaagtaagcatt
gactatccggaatacgagtttgatgaagtaactcccgaaactgcccttaaaaacatcgat
gaaataataaacgatgtccgaagacttctttcttcctatgaacggggacggattttaaga
gaaggtattaccgccgttatagccggaaaacccaatgtgggtaaatcgtctttattaaat
gctttattacggaaaaaaagggcaatagttaccgatatacccggcactacccgggacgtg
attgaagattatttaaatttaaaaggcattccggttaaaatcgtcgataccgcgggtatc
cgggaaacggaagatttagtggaaaaacttggagtagaaaagacccgggagtatttaaat
caggcggatgtgacgttatttgttgtcgacgttagtattgggattgatgaagatgatgag
aagattttaagtttaattaataaagataaaagcttgttggtcatcaataaaattgacttg
ctgcagggtaaggtaaattttgagcaatatgcagtaaaaacaggtattaaaaatttcgtt
cctttttcagccaggaactttgaaggtctggaaattttggaaaataagctttacgaaatt
ctcattcccgagcaggaaggagaaggtgaatccgctttaatttccaaccttcgccataaa
aattacctggaaaaagctttaaattcgttattaagtgccaaggaaagtatagcttctggc
gagccggtagatcttgtggccattgatttaaacgaggccttaagggaattaggggcaatt
accggcgatgctctcggtgatgagatcataaacgaaatattttcccaattttgtgttgga
aagtag
DBGET
integrated database retrieval system
