Carboxydothermus hydrogenoformans: CHY_0345
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Entry
CHY_0345 CDS
T00287
Name
(GenBank) peptidoglycan biosynthesis transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy00550
Peptidoglycan biosynthesis
chy01100
Metabolic pathways
chy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHY_0345
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CHY_0345
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chy01011
]
CHY_0345
Enzymes [BR:
chy01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CHY_0345
Peptidoglycan biosynthesis and degradation proteins [BR:
chy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CHY_0345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DUF2310
CesT
Motif
Other DBs
NCBI-ProteinID:
ABB14728
UniProt:
Q3AF76
LinkDB
All DBs
Position
299740..301692
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AA seq
650 aa
AA seq
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MGVVVTFFLFILWGRLFYLQVYATAKYQTLARKNAIRIIDVKAPRGEILDRNGKKIVTNK
AVYTVSLLFTGLKNADVILPKLAQILQVSEEELRLKIKNSKARPYEPIRLATDVPWEVVA
KIEERRYELPGVTVSIEPARDYPYGNLLAHVVGYIQEIKDTQLKEHQAEGYKLGDMFGQT
GLESFYESVLRGKNGGREIEVDAKGNPVRDLGIKTRPEQGNSLVLTIDVDLQKAAEESLK
KTIAALQNRYPDARAGAVVALDVRSGEVLAMASYPTFDPAAFPKGLTQKQVDEYIRNPDR
PLYNRAVSATYPPGSTFKMVTGMAALLNRVTTPSETIFDPGYYKLGNRAFKDWNPRGHGV
VNFVKAIKESCNVYFWTMARRLGVEKIVEVGKQFGLGMMTGIDLPGESSGLLPTPEWKKE
TNTAIIEKNLKPKIDKIKSDYEQRIARAKTSEEKKRLEAERDKKIQAINRQIEIYRWETE
WQQYDTLNMAIGQGYNNYTLLQLANYVAMIANGGIRYQPHLVKKVLDNRGKVIEEVKPRV
LSKAKIPENILNYVRQGMREVTMPGGTAGGVFAGFPVAVAAKTGTAQVFGKDDHGLFVAY
APFENPRIAVAAIIEHGGHGGSSAGLVARDVLAAYFKVPKVNTRVFGPVE
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtggtggtaacgtttttcctgtttattttatggggaaggcttttttatcttcaa
gtatacgctacggccaaatatcagaccttggcccgcaaaaacgccatcaggataattgat
gttaaagccccccggggagaaatattggaccggaatggcaaaaaaatagttaccaataaa
gccgtttataccgtttctttactgtttaccggcttaaaaaatgccgatgtaattttaccc
aaacttgcgcaaatccttcaggtttccgaagaggaactgcggttaaaaattaaaaactct
aaagcacggccgtatgaaccgattcgtttagctaccgatgttccctgggaggtggtagcg
aaaattgaagagagaaggtacgaacttccgggagttacggtaagcatcgagcccgcccgg
gattatccttacggtaatttattggctcacgtggtgggatatattcaggagataaaagat
acccagctaaaagagcatcaggccgaaggatacaagttgggggatatgttcggacaaacg
ggcttagagagtttttatgaatcggttttgcgcggaaaaaatggtggtcgggaaattgaa
gtggatgccaagggcaatcctgtccgggacttagggataaaaacccgaccggagcagggt
aattccttagttttaacaattgatgtagacctgcaaaaagctgcggaagaaagtttgaaa
aaaaccattgcagcgctgcaaaatcgttatcccgatgccagagcgggtgcggtagtggcc
cttgatgtgagaagcggggaagtgctggccatggccagttaccccacttttgatccggcg
gcttttcccaaggggttaacccaaaagcaggtggatgagtacataaggaatcccgatcgg
ccgctttataatcgcgcggtatcagctacctatcctccaggctccacctttaaaatggtc
accggcatggctgccctcttaaatcgggtaactactccttccgaaacaattttcgatcct
ggttactacaaactgggaaaccgtgcttttaaagattggaacccaaggggccacggggtt
gtaaactttgttaaagccattaaagagtcttgcaacgtttatttttggacgatggcccgg
cggctgggagtagaaaaaattgtggaagtgggtaaacaatttggtttgggaatgatgaca
ggcatagaccttcccggggagagttcgggacttttaccgactcccgagtggaaaaaggaa
accaatactgccattatcgagaaaaatttaaagcctaaaatagataaaataaaaagtgat
tacgagcaaagaatagcccgggctaaaacttccgaggagaaaaagcggttggaggcggaa
cgggacaaaaaaattcaggcaattaaccggcaaattgaaatttaccgctgggaaaccgag
tggcagcagtatgatacgcttaatatggccatcggtcagggttataacaattataccctt
ttgcagcttgccaattatgtagccatgatagccaatgggggaattcgttaccaacctcat
ttggtaaaaaaagttttggacaatcggggaaaggttatagaggaggtaaaacccagggtt
ttaagtaaagcaaagatccccgagaatattttaaattacgtgcggcaggggatgcgggaa
gtaacgatgcccgggggaactgccggaggagtgtttgcaggatttccggtagcggtggcg
gcaaaaaccggaacagctcaggttttcggtaaagacgatcacggcttgttcgtggcgtat
gccccttttgaaaatccccgaattgcagttgcggccattattgaacatggcggtcatggt
ggttcttcggcaggtttggtggccagggatgttttagcggcgtattttaaggtgccaaaa
gtaaataccagggtttttggcccggtggaataa
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