Carboxydothermus hydrogenoformans: CHY_0405
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Entry
CHY_0405 CDS
T00287
Name
(GenBank) conserved hypothetical protein
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy03030
DNA replication
chy03430
Mismatch repair
chy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHY_0405
03430 Mismatch repair
CHY_0405
03440 Homologous recombination
CHY_0405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chy03032
]
CHY_0405
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_0405
Enzymes [BR:
chy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHY_0405
DNA replication proteins [BR:
chy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHY_0405
DNA repair and recombination proteins [BR:
chy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHY_0405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF6036
CPSase_L_D3
Sigma70_r4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ABB14186
UniProt:
Q3AF18
LinkDB
All DBs
Position
347230..348213
Genome browser
AA seq
327 aa
AA seq
DB search
MIAYERFKNALTRGVLKPLYLFSGEERYFKERLFGEIKKYLGSNHEFNYEELDGHEVLPE
EVVARAETVSFFGQRFIVVKNCRFFSGKHDEEPLLNYLKNPAPRAVVIFSTELPVDKKKK
IYQEFLKNGEEIEFSRLDEKEVQELIKTWADRAGFNLEREALIVLAQSYGQNLVELEKEF
KKLVLYKLSEKIITLKDVLEVSGQDQEISVFYLVEELLSGKINRPKLKERLTNQEEAVKF
TGLVAKNLRQIYTVKVLQQKGKTLQEIAKITGIPEWLVKKTLRSAVHLSQEKLKKGITAL
ADLDVKIKSGERELTGLFERFFLLMKK
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatagcttacgaacggtttaaaaatgccttaacccgaggggttttaaaacccctttac
cttttttccggagaagagcggtattttaaagagcggctttttggggaaattaaaaaatat
ttaggaagcaaccacgagtttaactatgaagagctggatggtcatgaagttctccctgaa
gaagtggtagccagggcagaaacggtatcgttttttgggcaaaggttcattgttgtgaaa
aactgtcgctttttttccggaaaacatgacgaggaaccgcttttaaattacctgaaaaac
ccggcaccccgggcggtggttattttttccacagaacttcctgttgataagaaaaagaaa
atctatcaggagtttttaaaaaatggtgaggagattgaattttcccggttagatgaaaaa
gaagtccaggaactaattaaaacctgggcggaccgggcaggctttaatctcgaacgggaa
gcgttgatagttttagctcagagttacgggcagaatttagtggagttagaaaaagagttt
aaaaaattggttttatataaactttcggaaaagatcattactttaaaagatgttttggag
gtttccggccaggatcaagaaatctcggttttttatcttgttgaagaactactctccggg
aaaataaaccgacccaagctaaaagaaaggcttaccaatcaggaagaagcggttaaattt
accgggcttgtggcaaaaaacttaaggcaaatctataccgtaaaagttcttcagcaaaaa
ggtaaaacactgcaggaaattgcgaaaattaccggcattcccgaatggctggtaaaaaaa
accttaagaagtgcggtgcacttaagtcaggaaaaactgaaaaaaggaattactgccctg
gcggatcttgatgtaaaaataaaatccggtgaaagggagttaaccggattatttgagaga
ttttttctattaatgaaaaaataa
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