Carboxydothermus hydrogenoformans: CHY_0807
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Entry
CHY_0807 CDS
T00287
Name
(GenBank) chaperonin, 60 kDa
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHY_0807
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chy03019
]
CHY_0807
03110 Chaperones and folding catalysts [BR:
chy03110
]
CHY_0807
03029 Mitochondrial biogenesis [BR:
chy03029
]
CHY_0807
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
chy04147
]
CHY_0807
Enzymes [BR:
chy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CHY_0807
Messenger RNA biogenesis [BR:
chy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CHY_0807
Chaperones and folding catalysts [BR:
chy03110
]
Heat shock proteins
HSP60 / Chaperonin
CHY_0807
Mitochondrial biogenesis [BR:
chy03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CHY_0807
Exosome [BR:
chy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CHY_0807
Exosomal proteins of other body fluids (saliva and urine)
CHY_0807
Exosomal proteins of breast cancer cells
CHY_0807
Exosomal proteins of colorectal cancer cells
CHY_0807
Exosomal proteins of bladder cancer cells
CHY_0807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
NNH2
Motif
Other DBs
NCBI-ProteinID:
ABB15708
UniProt:
Q3ADX3
LinkDB
All DBs
Position
714805..716427
Genome browser
AA seq
540 aa
AA seq
DB search
MAGKQILFREDARRALERGVNALADAVKVTLGPKGRNVVLEKKFGSPQIINDGVSIAREI
ELADPVENMGAQLVKEVATKTNDVAGDGTTTATVLAQAIIREGLKNVTAGANPMILRKGI
EKAVAKAVEEIKAIAKPVETSEAIAQVAAISANDEEIGKLIAEAMEKVGKDGVITVEESQ
GLGTTLEVVEGMSFDRGYISPYMITDPDKMEAILNDPYILITDKKISAIADLLPILEKVV
QTGKPLLIIAEDVEGEALATLVVNKLRGTLTCVAVKAPGFGDRRKAMLEDIAILTNGQVV
SEELGFKLENATLSMLGRAKQVRVKKEETIIVGGQGSPEAIEKRIAQIKKQIEETTSDFD
REKLQERLAKLAGGVAVIQVGAATETEMKEKKLRIEDALNATRAAVEEGIVAGGGTTYIH
IIKALEELEKTATGDERTGIAIVRKALEEPLKQIAINAGLEGSVIVEKVKTLPVGHGFNA
LTEEYVDMIAAGIVDPAKVTRSALQNAASVAAMLLTTEALVAEKPEKEKKGPDMPNMDMM
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctggcaaacaaatattatttagagaagatgcccggagagctttagaaagaggcgta
aacgctctggcagatgcggtaaaggttactcttggtccgaaaggccgtaacgttgtttta
gaaaagaaatttggttcaccgcaaattattaacgacggtgtttccattgctcgggaaatt
gaacttgctgaccctgtagaaaacatgggagcgcagcttgtaaaagaagttgctaccaaa
accaacgatgtagccggtgacggtactaccaccgctaccgttttggctcaggctatcatt
cgggaaggcttaaagaacgttactgccggtgccaacccgatgattttacggaaaggtatt
gaaaaagctgttgccaaagcggtagaagaaattaaggctattgccaagccggtagaaact
tccgaagctatcgcccaggttgctgcaatttctgctaacgacgaggaaatcggtaagcta
attgctgaagcaatggaaaaagtgggtaaagacggggttatcaccgtagaagagtcccag
ggtcttggcactaccttagaagtagttgaaggtatgagctttgaccggggttacatttct
ccttacatgattaccgaccccgataagatggaagctattttaaacgatccttacatcctc
atcaccgataagaagatttccgcgattgctgacttactgccgattttagaaaaagttgtg
caaaccggtaagccccttttaatcattgctgaagatgtcgaaggggaagctctcgctacc
ctggttgtgaacaaactgcgcggtaccttgacctgtgtcgctgtaaaagctcccggcttt
ggtgaccggagaaaggctatgcttgaagatatcgccatcctcaccaacggccaggtggta
agcgaagagcttggctttaagctcgaaaatgctaccctttcgatgctcggtcgggctaag
caagtccgggttaagaaagaagaaaccatcattgttggtggtcaaggttctccggaagct
attgaaaagcggattgctcaaatcaagaagcaaatcgaagaaaccacttccgattttgac
cgggaaaaattacaggagcgtctggctaagcttgccggtggcgtagcggtaatccaggta
ggtgctgctaccgaaaccgaaatgaaagaaaagaaactccgcattgaagacgctttgaac
gctacccgggcagcggtggaagaaggtattgtagctggtggtggcacaacctacatccac
atcattaaggctttggaagagcttgaaaagaccgctaccggcgatgaaagaaccggtatc
gccattgtccggaaagctttagaagaacccttaaagcaaattgctattaacgctggctta
gagggttcggtcatcgttgaaaaggttaagaccttaccggtaggccatggcttcaacgct
ctaaccgaagaatatgttgacatgatagctgctggtattgttgacccggctaaggtcacc
cggagtgctttacaaaacgctgcctccgttgctgctatgctcctcaccacggaagctttg
gtggctgaaaagccggaaaaagaaaagaaaggccctgacatgcccaacatggacatgatg
taa
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