Carboxydothermus hydrogenoformans: CHY_0946
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Entry
CHY_0946 CDS
T00287
Name
(GenBank) conserved hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
chy
Carboxydothermus hydrogenoformans
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_0946
DNA repair and recombination proteins [BR:
chy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CHY_0946
Archaeal homologous recombinant proteins
CHY_0946
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_27
AAA_21
Rad50_zn_hook
AAA_29
AcMNPV_Ac109
Glyco_transf_11
Zn_ribbon_TFIIB
DUF7560
Motif
Other DBs
NCBI-ProteinID:
ABB15716
UniProt:
Q3ADJ1
LinkDB
All DBs
Position
836960..838399
Genome browser
AA seq
479 aa
AA seq
DB search
MYLEKLILVNFQSHKYSEFNFAPGLNVIVGESDRGKTAVIRALRWLFYNEPKGSEFIRVG
EREARVTAHFSNGLIVSRERSDRKNRYVLIKPGEAPVVFEKFGQEVPPEISEVLGVQKIR
LDKDWEVALNLSTQLEPPFLLFESATRKAKAIGQFQGVHLLDYAAKNVSRDIRNIDEEIR
YKNTEIAALKEKLEEFADLPHLSARLNNLKTRKFIAQSVIERLNNLTALRENLEQVRQKI
QENRDIVKKFGVVSVEKFWKIEALYKRYQELLKLKESYTGILQKKREALEILNHTTALPR
AKEYLEEAMDTYFKLKTLQQLAEKRQKISEQKRKLLYIISILTPVEVTARKYQEILPDCK
KQQELLGKYQELQKLGRHKTYYAGIIYKYRKIPELAQTLKNLEEKLKRYEQLTVLFHNLS
GIHRRKKEQERELERIKQEVVSLQDQYREALLQAGRCPTCNTPLDEITVQKIIFGEVVR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtaccttgaaaaattaattctggtaaattttcagtcccataaatattcggaatttaat
tttgcaccgggcttaaatgtcatcgttggagaatcggaccgcgggaaaacggcggtaatc
cgggcgctgcgctggcttttttacaacgaacccaaagggagcgagtttatccgggtagga
gaaagggaagcaagggtgaccgcccatttttctaacggcttaattgtttcccgggaaagg
agcgaccggaaaaaccgctatgttttaataaaacccggggaagcaccggtagttttcgaa
aagtttggtcaggaggtaccaccggaaattagcgaagttttgggagtgcaaaaaatccgc
ctggataaagattgggaagtagctttgaatttaagtacccagttagaaccgcctttttta
cttttcgaatcggccacccgtaaggccaaagctatcgggcagtttcaaggggtgcatctt
ttggattacgcggcgaaaaacgtatcccgggatatccggaacatcgatgaagagatacgt
tataaaaatactgaaattgccgcattaaaagaaaaacttgaggagtttgcggatttgccg
cacctttccgcaagattaaataacttaaaaaccagaaaatttattgcccaaagtgttatt
gaacgcttgaataacttaaccgcccttcgggaaaatctggaacaggtaaggcagaaaatt
caagaaaatagagatatagttaaaaaatttggggtggtctcggtagaaaaattttggaaa
atcgaagctttgtataaacgttatcaggaacttttaaagttaaaggaaagttatacggga
attctacaaaagaaaagagaagctctggaaattctaaaccacaccacagcgctacccagg
gcgaaagagtatttagaggaagctatggatacttactttaagctaaaaactttacagcaa
ttggcggaaaaacggcaaaagattagcgaacagaaaagaaaacttctgtatataatcagt
atcttaactccggtggaagttaccgcaaggaaataccaggagatattgcccgactgcaaa
aaacagcaggagttacttggtaaataccaggagttacagaaacttggcaggcataaaact
tattacgcgggaattatttacaaataccggaaaataccggaattggcccaaactttaaaa
aatcttgaagaaaaattaaaaaggtatgaacagttaacggttctctttcataacctttcg
gggatacaccggaggaaaaaagagcaggaaagggaacttgagagaattaagcaggaggta
gttagcctgcaagatcagtatagagaggcgctcctgcaggccggacgctgcccgacctgt
aatacacctctggatgaaataaccgtgcaaaagataatctttggggaggtagtgcgatga
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