Carboxydothermus hydrogenoformans: CHY_1099
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Entry
CHY_1099 CDS
T00287
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy03420
Nucleotide excision repair
chy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHY_1099 (pcrA)
03430 Mismatch repair
CHY_1099 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_1099 (pcrA)
Enzymes [BR:
chy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHY_1099 (pcrA)
DNA repair and recombination proteins [BR:
chy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHY_1099 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CHY_1099 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_14
AAA_11
MSSS
ResIII
DEAD
Phage_DNA_bind
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
ABB16157
UniProt:
Q3AD39
LinkDB
All DBs
Position
972468..974624
Genome browser
AA seq
718 aa
AA seq
DB search
MEKLLATLNPAQREAVTHTHGPLLVLAGAGTGKTRVLTFRIAHLLYRKMAYPHEILAITF
TNKAAREMKERVERLISGSAREIWISTFHSFALRILRNDIEKLGFSRDFTVYDEEDQLQV
IKECLKELNIDDKRFAPKAIAYHISSAKDKLISPRQYRDDADDLFKEKVAIIYNMYQEKL
NKNNALDFDDLLYYAVRLFENYPRVLEYYQRRFKYILVDEYQDTSHAQYRLVNLLAQKHR
NLCVVGDPDQSIYSWRGADITNILNFERDYPEAKVVILKENYRSTQKILDAANAVIAKNR
MRKEKELFSTKESGHPVYFYPAVDEKDEAAFVALTIESLVKSGEYNFNDIALLYRTHALS
RNFEEAFMQRGIPYVIFGSRRFYDRKEIKDIIAYLRIVANPYDKVALKRIINEPKRGIGE
ASFAKVEAYADETGLPIGLLLLRDEALALVSGKTRKALKEFGEMLLWFRELKDRVSVTKL
TEEILERSGYLPALKAEDTMEARARIENLNEFLTVTQAFERESEDKSLEAFLGTISLLTD
ADTEEGGENRVRMMTLHAAKGLEFPVVFLVGLEEGIFPHSRAIFSIDPQELEEERRLCYV
GITRAQKRLYLTRAWRRTVYGRTDFNEPSRFLDEIPEELIESLLETVSGGNPVDKTLSPG
GEKQKGAFSPGDRVSHKKFGVGTVLEVKPKEGDVIIKVRFEGGEVKELLGSFAPLVKV
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctgttagctactttaaacccagctcaaagagaagcggttacccatacccat
gggccacttttagttttggccggagcgggaacgggaaaaaccagagttttaaccttccgt
atcgctcacttgctttatcggaaaatggcctacccccatgaaattttagccataactttt
accaataaagcggcccgcgaaatgaaagaacgggtagaaaggttaatctcgggaagtgcc
cgggaaatctggatttctacttttcattcttttgcgttaagaatattacggaatgatatt
gaaaaacttggttttagccgggattttaccgtttatgatgaggaagaccaattgcaggta
ataaaagagtgtttaaaagagctaaatattgacgataaacggtttgctcccaaagctatt
gcctaccatatttcctcggccaaggacaagcttatttctccccggcagtatagagacgat
gccgatgacttatttaaagaaaaagtggcgataatttataatatgtaccaggaaaagctt
aataaaaataatgcccttgactttgatgatttactttattatgcggtaagactatttgaa
aattatcctcgcgttcttgaatactaccagcggcgatttaaatatattctggtggatgag
tatcaggatacaagccatgcccagtaccggctggtaaatcttttagcgcaaaaacaccgc
aatctctgtgtggtgggagatcccgaccagagcatttactcttggcggggagcggatatt
accaatatcttaaattttgaacgggactatccggaagcaaaagtggtgatcttaaaagaa
aattaccgctccacccagaaaatcctcgatgcggctaatgcggtaattgccaaaaaccgg
atgcgcaaggaaaaagagcttttttctaccaaagaatccggtcatccggtttacttttat
cctgcagtggatgaaaaggacgaagcggcgtttgtggctttaaccatcgaatctttggtg
aaaagcggcgagtataatttcaatgacatagctcttttgtatcgaacccatgctttatcc
cggaactttgaagaagcgtttatgcaaagaggcattccgtacgtgatttttggtagcaga
cgcttttatgatcgcaaggagataaaagacattattgcttatttacggatagtagccaat
ccttatgataaagtggctttaaaaagaatcattaatgaacccaagcgaggaatcggtgag
gcgagttttgccaaagttgaagcttatgccgacgaaactggactacccatagggttattg
cttttaagggatgaagctttggctttggtttccggaaaaaccaggaaagctttaaaggaa
tttggcgaaatgctcctctggtttcgggaattaaaggacagggtaagtgttaccaaactt
accgaagaaattttggagcgttccgggtatctaccggcgttaaaagcggaagataccatg
gaagcaagggcgagaattgaaaacttaaacgagtttttgactgtaacccaggcttttgaa
cgggagagcgaagataagtctttagaggcgtttttaggtaccatatccctgttaaccgat
gcggatactgaagaaggtggcgaaaaccgggtgcggatgatgaccctccatgccgccaaa
ggtctggagtttccggtggtttttctggtgggtttagaggaagggatatttcctcacagc
cgggccattttcagtattgacccccaggaattagaagaagaaagaaggctttgctatgta
ggcattacccgggcgcaaaagaggctttatcttacccgggcctggcggcggacggtttac
ggacggaccgactttaacgagccttcccgctttttagatgaaatacctgaagaattaatt
gaaagtttattagaaacagtttccggaggtaatccagttgacaaaactctttctccgggg
ggagaaaagcaaaagggggctttttctccgggagatagggtaagccataaaaagtttgga
gtgggaacggtgctggaagttaaacccaaagagggagatgtaattataaaagtgagattt
gaaggtggtgaagtaaaagaacttctgggaagttttgctcctctggtaaaagtctaa
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