Carboxydothermus hydrogenoformans: CHY_1254
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Entry
CHY_1254 CDS
T00287
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
chy
Carboxydothermus hydrogenoformans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
PAS
PAS_9
AAA_5
AAA
AAA_2
Mg_chelatase
PAS_4
PAS_10
HTH_50
AAA_19
HTH_17
DUF134
PAS_7
HTH_1
SpoVT_C
RWP-RK
HTH_23
HTH_30
HTH_psq
HTH_11
PAS_8
HTH_34
AAA_3
HTH_24
HTH_28
Sigma70_r4
Motif
Other DBs
NCBI-ProteinID:
ABB13987
UniProt:
Q3ACP6
LinkDB
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Position
1116505..1118397
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AA seq
630 aa
AA seq
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MEITVNIVLIAPYKNLLEIAIEVKKDFDFAFNLELGDLSEGVKIAQEWEKKGADIIISRG
GTYQLIKEAVSIPVVEIKVSPFDILRQFKGLIGYSEPIGVAGYMNVIYGSEVIGEVLNLN
LIKIEIKKETEALFQIAEAKEKGAKIIIGDTIGACCAAQLGLKSRLIISGKEAVANALSE
AFRLAEAIKSEKEKTEQIKTIVDFVHDGIIAVDKDGRISIYNKMAEKIFKKLPSEVIGKK
VETVIPNTRLYEVIKTGKPEIGKIQEISGTMIATNRVPIVVGNEVVGAVATFQDVAEIQN
MEQKIRRRLADKGLIASFKFDDIIFISDKMKDVVNQAKKYALLDSTVLILGETGTGKELF
AQSIHNASERKNGPFVAINCAALPENLLESELFGYAEGAFTGARKGGKAGLFELAHKGTI
FLDEIGEMPMGLQSKLLRVIQEKKVMRIGDDRLIPVDVRIICATNRNLIEMINEGKFKRD
LFYRISILQIHIPSLRERKEDIEVLVPYFIKKYSLICKKHIQGITSRGMELLKKWDYPGN
VRELESIIERACAICEGNIIDVRDIKLYNDQDSMENKVSSQSFLEIKPLDEIEKEYIKKV
IKFTDGNLSEAAKKLGISRTTLWRKLKNFN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaataacagtgaatattgtgctcattgctccttataaaaatctgcttgaaatagct
attgaggtcaaaaaggattttgattttgcttttaatttggaacttggagatctaagtgaa
ggcgtgaaaatagcacaggagtgggaaaagaaaggagccgacatcattattagccgtggt
ggtacttaccaacttataaaagaagcagtatcgatacctgtagttgaaataaaagttagc
cccttcgatattctcaggcagtttaaaggactgattggttatagcgaacctattggagtc
gctggttatatgaatgtaatttacggttctgaagttatcggggaagtattgaatttaaac
cttattaaaatagaaatcaaaaaggaaacagaagctctatttcaaattgctgaagccaag
gaaaaaggcgcaaagataatcatcggtgacaccattggtgcttgttgcgctgcacaacta
gggcttaaaagtcggctaattatttctggtaaagaagcggttgcaaatgcgcttagtgaa
gcattcaggctagcggaagccattaaatcagaaaaagaaaaaaccgaacagattaaaaca
attgttgactttgtacatgacgggattattgccgtggataaagatgggaggatatctata
tataataaaatggcggaaaaaatattcaaaaaactaccttccgaagttataggaaaaaaa
gtagaaacagtaatacctaatacccgattatacgaggtgataaagacaggaaagcctgaa
atcggaaaaatacaggaaatttcgggaactatgattgccacaaaccgagttccaattgtg
gtaggtaatgaggttgtaggagcagttgcaacatttcaggatgtggctgaaattcaaaat
atggaacaaaaaataagaagacggctggcagataaaggattgattgcgtcttttaagttt
gatgacattatttttataagtgataaaatgaaagatgttgttaatcaagcaaaaaaatat
gctcttttagattctacagtccttattttgggcgaaacgggtacgggcaaggaacttttt
gcccaaagtattcacaatgcaagtgaaagaaaaaatggtccatttgtagcaataaattgt
gctgctttgccagaaaatttattagagagcgaattgttcggatatgctgaaggagctttt
actggcgcaagaaaaggaggaaaggcagggctattcgagcttgctcataaaggtaccata
tttttagacgaaatcggtgaaatgcctatggggctccagtcaaaactgctaagagtaatc
caagaaaaaaaggtgatgagaataggagatgataggttaatcccggttgatgtgagaata
atatgtgccacaaatcgaaatcttattgaaatgattaatgaaggtaagtttaaacgagac
ttattttaccggattagcattcttcaaatccatataccgtctctcagggaaagaaaagag
gacattgaagtacttgtaccatactttataaaaaaatattcacttatttgcaaaaagcat
attcaaggaatcacttccagggggatggagcttttaaagaaatgggattatccaggaaat
gtaagggaattggagagcattatcgaaagagcctgcgctatttgcgaaggtaatattatc
gatgtaagggatattaaactatacaatgatcaagatagtatggaaaataaagtgtcaagt
caatccttccttgaaataaaaccattagacgaaattgaaaaagaatatattaaaaaggtt
ataaaatttacagatggaaatttatcagaagcagcgaaaaagcttggaataagtagaaca
actttatggagaaaattaaaaaatttcaattaa
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