Carboxydothermus hydrogenoformans: CHY_1434
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Entry
CHY_1434 CDS
T00287
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy02024
Quorum sensing
chy03060
Protein export
chy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
CHY_1434 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
CHY_1434 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHY_1434 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
chy02044
]
CHY_1434 (ffh)
Enzymes [BR:
chy01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
CHY_1434 (ffh)
Secretion system [BR:
chy02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
CHY_1434 (ffh)
Eukaryotic Sec-SRP protein
CHY_1434 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
AAA_31
ParA
AAA_30
nSTAND3
APS_kinase
AAA_16
AAA_33
ArsA_ATPase
AAA_15
ResIII
AAA_17
6PF2K
MeaB
GTP_EFTU
AAA_19
cobW
AAA_18
MMR_HSR1
NPHP3_N
NACHT
ABC_tran
AAA_5
Thymidylate_kin
HTH_Crp_2
nSTAND_NTPase7
Diphthamide_syn
Adaptin_binding
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ABB13690
UniProt:
Q3AC68
LinkDB
All DBs
Position
complement(1280594..1281934)
Genome browser
AA seq
446 aa
AA seq
DB search
MVFENLSNKLQEVFKKLKGKGRLTEEDVNLALREVRIALLEADVNFQVVKDFIAKVKEKA
VGHEVLESLTPGQQVIKIVHEELINLMGKTNAKLNDAGSPPTIIMLVGLQGAGKTTTAAK
LAYLLKKQGKKPLLVAADVYRPAAIKQLQVLGDTIDVPVFTMGEQSPVDIAKASINFAKS
NLKNYVIIDTAGRLHINEELMDELKKIKDVVHPHEILLVVDAMTGQDAVNVAKSFNDELG
LTGVILTKLDGDTKGGAALSVKAVTGCPIKFAGMGEKIENLEPFYPDRMASRILGMGDVL
TLIEKAKEALDAEKAQKMQEKLKSREFDLEDFLDSMQQIKKMGPLEQLLGMIPGMGKVKD
IAGMVDEKELKHIEAIIYSMTPEERRKPEIIDGSRKKRIAKGSGTSIQEVNRLLKQFEQM
KKLMKQFGGMEKQLKKGKKIKFPFFS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggtttttgaaaacctgtcaaataaacttcaggaagtttttaaaaagctaaaaggtaag
ggaagattaaccgaagaagatgttaacctggcactcagggaagtgcggatagctcttttg
gaagctgatgttaattttcaggtagtcaaagattttattgctaaagtaaaagaaaaagca
gttggtcatgaagtactggaaagtttaaccccggggcagcaggtaataaaaattgttcat
gaagaattaataaatttaatgggaaaaaccaatgcaaaattaaatgatgccggttcgcct
ccaacaattattatgcttgtgggcttgcagggggccggtaagactactaccgctgccaag
ttagcctatttattaaaaaaacaggggaagaaaccgcttttagtagctgcggacgtttac
cgcccagcggcaatcaaacagctccaggttttaggtgataccattgacgtgccggtattt
acgatgggagagcagtcaccggtagatattgccaaagcttcgattaattttgccaagtca
aacttaaaaaattacgtcataattgatactgcaggacgcttgcacatcaatgaagaattg
atggatgaactaaagaaaatcaaggatgtggttcatccccacgagatactgttggttgtg
gacgccatgaccggtcaggatgcggtaaatgtggcaaaaagtttcaacgatgagttaggt
ttaaccggggtgattcttaccaaattagatggggatactaaagggggtgcagccttatcg
gttaaggctgtaaccggatgcccgattaagtttgcgggaatgggtgaaaaaattgaaaac
ttggagcctttttatccagatcgaatggcttcccgtattttgggtatgggtgacgtttta
accctgattgaaaaagctaaagaagccttagatgcagaaaaagcccagaaaatgcaggaa
aaattaaaaagcagggagtttgatttggaagattttttggattccatgcagcaaataaag
aagatggggccgttagagcaattactgggaatgattcctgggatgggtaaagtaaaagat
attgcggggatggttgatgaaaaagagctaaaacacatcgaagctattatttattccatg
actcccgaagaaagaagaaagccggaaattattgatggtagccgaaaaaagcgtattgct
aaaggtagcggaacttcgattcaagaggttaaccggttgttaaagcaatttgaacagatg
aagaaattgatgaaacaatttggtggtatggagaaacagttaaaaaaaggcaaaaaaatt
aagtttcccttcttttcataa
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