Carboxydothermus hydrogenoformans: CHY_1443
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Entry
CHY_1443 CDS
T00287
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
chy
Carboxydothermus hydrogenoformans
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
chy03036
]
CHY_1443 (smc)
Chromosome and associated proteins [BR:
chy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
CHY_1443 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
SlyX
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABB16024
UniProt:
Q3AC59
LinkDB
All DBs
Position
complement(1289906..1293463)
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AA seq
1185 aa
AA seq
DB search
MLKKVVIQGFKSFAEKTEITFEPSITGIVGPNGSGKSNVAEAIRWALGETKTKILRSERQ
QDVIFTGSQGRKPVGMAEVTLILDNSNKHFPLPYAEIAITRRFFRSGESEFYINKSPCRL
KDIHELLVDTGLGKHGYAIIGQGQVDEILFSSPEEKRSYLEEAAGINRFRMRELEAKKKL
LETQNGITRLNDLTNELTNQLQAKEQDVIKAKTYLTLKEKLTFKAKNYYGIKIKNLLDKV
RENEEKITLLHNLIEKNQDQVNRLEASFAKILSEEGKLGLFSDNLQKIVLNLESCLEKLD
NVKKYQQEEENRLWLELKSLKEQIKANGRKLVEINQELNSYQRQVKDLKAKEREIIGNLK
VQKQKLGINEEKLLELKKSLENCKDEQFELNFREVSLRNEINFISDSLTRLTNDSLKIEK
DIYELNREIGEIENTLRSLNDFKKENLRKREVLKNKRKKLEEELNLLAKNILILQNEKRV
LEKKYNENITRLQILTKLEESYEGYGKDVKNLFEAKKSGLLPNPDNIIGTVGEFLEVDER
YRLAVETALGAGIKNVIVKSSRDLEGIIRYLKLKNLGRITFLALDLLETESLKGDFSNLT
DSDGFIGTALDLISFPQELSKAYESLLGKVLVGKDYQSCLIIAKKTKHRYKVVSLEGELL
LPGGIIIGGSFNQTVSVLQRKNEIKLLQKQVDELLQKNNEVEEALSAFLKKQEDIDATIK
LTGEKLSDIEAQLTEADLKEQNIKDKRNLIESRLIELKGQLDKNNREKKNLLVEKENREQ
QINNIISLKKKLEEKIAFLEKEISRINDLIYENQNYYQELTLQQVQLEKALENIFNLINE
KSLQKKELFERQKVSAKKALEFKNKILNLKKDFLTLERKIAAHGDLLSVSKKYFETVKNK
HEELKDKLSEMQTTLTKTQKLIQKHFAEISRLETEQRNLLQEINRLKLLLNEKYDIVLGD
EEVLKLEPVYIEEREIEELYNQIQGLGPVNLFVIDEVKRLEERINFLNQQRNDLNEAKEQ
LEKLLSQLTEEMEQRFNEFLKLLNEEYDLVFKELFGGGRAALEKVVGEDQKEGIEIIVEL
PGKKRQPLGLLSGGERALASIALLFALFNLKPSPFCVLDEIDAALDEANVQRFAAYLKKI
GERNQVILITHRRGSMEVCAKLIGISMQDGCSKVLSLPMENIKAG
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaaaaagtagttatccagggttttaaatcctttgcggaaaaaacggaaataact
tttgaaccttcgataacgggtatcgtgggaccaaacggtagcggtaaaagtaacgttgcg
gaagcaattcgctgggctttgggagaaacaaaaacaaagattttacgttctgagcgacag
caggatgtaatctttaccggttcgcagggaagaaaaccggtaggaatggctgaggtaaca
ttaattttagacaacagtaataagcattttcccttgccttacgctgagatagcaattacg
cggcgcttttttcgttcgggagaaagtgaattttacataaataaatctccctgccgactt
aaagacattcatgagttattggtggatactgggcttgggaagcatggctatgccattatc
ggtcagggccaggtggatgagattctgttttcgtcaccggaagaaaaaagaagctatctg
gaagaggctgcaggaattaaccgctttcggatgcgggagttggaagcgaagaaaaagctg
ttggaaactcagaacgggattaccaggcttaatgacctgaccaacgagttaactaaccaa
ttacaggctaaagaacaggatgttattaaagcaaaaacgtatttaacattaaaagaaaaa
cttacctttaaagctaaaaattattatggaataaaaataaaaaatttactggataaagtt
cgggaaaacgaagaaaaaatcaccctgttacataatcttattgaaaagaatcaggaccag
gttaaccgcctggaagcaagttttgcaaagattctttccgaggaaggaaagttaggtctt
ttttctgataacctgcagaaaattgttttaaatttagaaagctgtttagagaaacttgac
aacgtcaaaaaatatcaacaagaagaagaaaatcgcctctggttggagcttaaaagctta
aaagaacagattaaagcaaatggcaggaaacttgttgaaataaatcaagaattaaattcg
taccaaagacaagtaaaggatttaaaagccaaagaaagggagattatcggaaatcttaaa
gtgcagaagcaaaagcttgggataaacgaagagaaacttttggaattaaagaagagcttg
gaaaattgtaaagatgaacaatttgagttaaattttcgtgaagtgtcgttaaggaatgaa
attaattttatttctgactccttaacaaggttaactaacgattctttaaagattgaaaaa
gatatatatgaactaaatagagaaattggtgaaatagaaaatactctgagaagcttaaac
gattttaaaaaggaaaatctgagaaagcgggaagtgttaaaaaataaacgaaagaaactg
gaagaagaattgaatttattagccaaaaatattttaatcctgcaaaacgaaaaaagggtt
ttggaaaaaaaatataatgaaaatattacccgcttacaaatattaactaagcttgaagag
agttatgaaggttacggaaaagacgtaaaaaatttatttgaggcaaaaaaaagtggctta
ctgcctaatccggataatatcataggaactgttggggagtttttagaagttgatgaaaga
tatcgattagcggttgaaactgctttgggtgcggggataaaaaatgttattgtgaaaagt
tctcgggatttagaaggtattataagatatttaaaattaaaaaatctcggcagaataacc
tttttggcccttgatttgctggaaacggaaagtttaaaaggtgacttcagcaatttaacg
gatagtgatggttttataggtactgcccttgatttaatttcgtttccccaggagctttct
aaagcttacgaaagccttttaggtaaagttctggtaggaaaggattatcaatcctgctta
atcattgcgaaaaagaccaaacatcgttataaagtagtgagtcttgagggagaattgctg
ctccctggtggaattattattggtggtagttttaatcaaactgtctcggttttacaaaga
aaaaatgaaataaagttacttcaaaagcaagttgatgagcttttacaaaagaataatgaa
gtggaagaggcattaagtgcatttttaaaaaaacaggaggatattgacgcaacaataaaa
ttaactggagaaaagctgagtgacatagaagcccagctaactgaggccgatttaaaagaa
caaaatatcaaagataaaaggaatttaatagaaagtaggttaattgagctaaaagggcag
ttagataaaaataatagggaaaagaaaaatttgttagtggaaaaagaaaatagggaacaa
caaatcaacaatattatttctcttaagaaaaaattagaggaaaagattgcttttcttgaa
aaggaaatatccagaatcaatgatttaatatatgaaaatcaaaattactatcaagaacta
acgttacagcaggttcaattagaaaaggcgctggaaaatatttttaaccttataaatgaa
aaaagtctccaaaaaaaagaactctttgaaagacagaaggtcagtgctaaaaaagcctta
gagtttaaaaataaaattttaaatcttaaaaaagattttttaactttagagcgcaagata
gcggcccatggggatttactttctgtgagtaaaaaatattttgaaactgttaaaaataag
catgaggagttaaaggataaactttcggaaatgcaaacgactctgacaaaaacccaaaaa
ctaatacaaaaacattttgccgagatttcgcgtttagaaacggaacagcgcaacctttta
caggaaatcaacaggttaaagttgttattgaatgaaaaatacgatatagtgttgggagat
gaggaagtattaaaattagaaccggtttatattgaggaaagggaaattgaagagctttac
aatcaaattcaggggttgggcccggtaaatctttttgtaattgatgaagttaagcgattg
gaagaacgcattaattttttaaatcagcaaagaaatgatcttaatgaggctaaagaacaa
ttagaaaaacttttaagccaattaaccgaagaaatggagcaaaggtttaacgagttttta
aagttacttaacgaagagtatgacttagtatttaaagagctatttgggggaggacgtgct
gccttagaaaaagttgttggagaagatcaaaaagagggaattgagattattgtggagctt
ccagggaaaaagcgccaacctttggggcttctttccggtggcgaaagggctctggcctca
atagccttgctttttgccctgtttaatctaaaaccgtcacctttttgcgttttggatgaa
attgatgccgctttagatgaagcaaatgttcagcgttttgctgcttacttaaaaaaaatt
ggggaaagaaaccaggtgatccttatcacccaccggcggggaagtatggaagtctgtgca
aagttaattggcattagcatgcaagatggatgttccaaagttctttcgcttcccatggaa
aatattaaagcagggtaa
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