Carboxydothermus hydrogenoformans: CHY_1627
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Entry
CHY_1627 CDS
T00287
Name
(GenBank) tRNA pseudouridine synthase D family protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
chy
Carboxydothermus hydrogenoformans
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chy03016
]
CHY_1627
Enzymes [BR:
chy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
CHY_1627
Transfer RNA biogenesis [BR:
chy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHY_1627
Prokaryotic type
CHY_1627
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ABB16186
UniProt:
Q3ABN4
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All DBs
Position
complement(1462237..1463400)
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AA seq
387 aa
AA seq
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MKLKVKPDDFIVKEEIKAPILKEGDFKVYLLEKRYWNTLDALQRIAAENGLRLSEIGYGG
RKDRYGHTFQYITVRATKNLTTREKNLKLTLMGYLNLPMSPELIAGNHFEITLRALSGEE
GRDLIKRGENVKKYGFPNYFDDQRFGSYDKEQGFFAKKLLLGHLNGALKIYLTSIYPEES
KEAKERKRFFMANWGNWSVCLEASKTRVEREIFSLLEKEPKNFAGAINLIPKEQLSLYFA
AYQGYLYNNLLKEVLLNQGIELRAYPGVVDDYLFYLTLPKKSFTYLKSLMLPTAAQKVPF
PNEEVRREYFKILEREGLKSGDFNLRKIRKVYFKSFLRPAVVIPEGFHVGNLVKDELYPG
KQKLQLKFFLPRGSYATMLIKALSVNY
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaaagtcaaacctgacgattttatcgtcaaagaggaaatcaaggcaccaatc
ttaaaagaaggagattttaaagtttatcttttagaaaaacgctattggaatactttagat
gccttgcagagaattgctgccgaaaacggtttaagactttcggaaattggttatggcgga
aggaaggaccgctatggccatacttttcaatacataacagtcagagctaccaaaaattta
acgacccgggaaaaaaatttaaagttgactttaatgggttatcttaatttgccaatgagc
ccggaattaattgcgggaaatcattttgagataacattacgggctctttccggagaagag
gggcgcgacctgataaaaaggggagaaaacgttaaaaagtacggttttcccaattacttt
gatgaccagcgctttggaagttacgataaagaacaaggcttttttgcaaaaaaattattg
ctgggtcatcttaatggagctttaaagatttatttaacctcgatttatcccgaagaatca
aaggaagcaaaggaaagaaaaaggttttttatggctaactggggtaattggtccgtgtgt
cttgaagcttctaaaactcgagtggaacgggaaatttttagtttattagaaaaggaacca
aaaaactttgcgggagcgataaatttaattcctaaagaacagctttctctttactttgct
gcttatcaaggttacctttacaataacttattaaaagaagtcctcttaaatcaaggaatt
gagctaagagcgtatccgggggtagtagatgactatttattttatttaacactaccgaaa
aagagttttacttatttaaaaagtttaatgctgccaacagcagcccaaaaagttcccttc
cccaacgaggaagtgcggcgggagtactttaaaatcttggaacgggaaggcttgaaaagt
ggtgattttaatttacgaaaaatccgtaaggtttattttaaatcgtttttaagacctgcg
gtggtaattcccgaagggtttcatgtaggaaaccttgtcaaagatgaactttacccggga
aaacaaaaattacagttaaaatttttccttccccggggaagttatgccacgatgttaatt
aaagctttgagcgtaaattattag
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