Carboxydothermus hydrogenoformans: CHY_2075
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Entry
CHY_2075 CDS
T00287
Symbol
pbpB
Name
(GenBank) penicillin-binding protein 2B
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy00550
Peptidoglycan biosynthesis
chy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CHY_2075 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chy01011
]
CHY_2075 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
chy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CHY_2075 (pbpB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
BAR_2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ABB14933
UniProt:
Q3AAE0
LinkDB
All DBs
Position
complement(1860768..1862987)
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AA seq
739 aa
AA seq
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MQNYKTIYKKRTGALFLLLAAFASIIIVRLFYLQVIKAETLRSEALADRQSEIILPPQRG
NIYDRNGNLLAQSISVESLVANPKQLMKYYYDETKEAPPEDKEKDGKSLKPKPLGLLVDK
LSKILNLDEKAKENLRQKLSNTRSSFIWIKRKLSYDEAKALKKLLADKEDEVYTFGLELV
EETQRYYPHNDFAAHLLGYAGTDNQGLAGLELSLDKYLKGIPGRLVTERDARGLEIPESS
SLYIPARPGNNVYLTIDETIQYFVERELNNIESQLKPALAMIIVMDPKTGEILGMGSRPN
FNPNEFAKYPAEVREKNFAIWYNYEPGSTFKIITSAAALEEGVVHPQDRFYDPGYIVVNG
RKIRCWSKTPHGAQSFAEVIQNSCNPGFVKVGLSLGKERFYKYIRSFGFGEKTGIELPGE
QKGLIIPEDKVTNVNLATISIGQSIAVTPIQLIRAVCAVANGGKLVEPHVVKKIVDQAGN
IVLENKPRYLKRVISEETARTLRELLERVVLKGTGTKAYIKGFRVAGKTGTAQVVSPTGG
YAPGKYVASFVGFAPANDPKFAALVVIVEPSTGVYYGGQIAAPVFKSLGEDILRYMGVKP
QEDPEPAKNEGPIEVFPEEVRVPALEGLTLWEAQKKIIENGLIFNVEGHGPKVVKQSPEP
GVIVPEGTEITLTLGQGKGDTDKVIVPELTGLTFDEVSGILKRLGLGFRYIGSGVAVEQN
ISPGTVVPPGTVVEVKFKN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaaattataaaaccatttataaaaaaagaaccggtgcattattcttgcttttagct
gcttttgcctccataatcattgtgaggcttttttatttgcaggtgataaaagccgagact
ttaagaagtgaagctttagcagaccggcaaagtgaaataattttaccgccgcaaagggga
aatatttatgatcgcaacggaaatttattagcccagtccatcagtgtggaatcattagta
gcaaatcccaaacagttgatgaaatattattacgatgaaaccaaggaagctcctccagaa
gataaggaaaaggatgggaaaagcctaaagcccaagcctttaggtttactggtagataag
ttaagcaagattttaaatttagatgaaaaagccaaggaaaatttacgccaaaaactttcc
aacacccggagtagttttatttggattaaacggaaactttcctacgatgaagccaaagct
ttgaaaaagctcttagcggataaggaagatgaggtttatactttcggtcttgaattagtg
gaagaaacccaacggtactacccccataatgattttgccgcacacctcttaggttatgct
ggtaccgataatcaggggcttgccggtcttgaacttagtttagataagtatctaaaaggt
atccctggccgcctggtcaccgaaagagacgcccggggtttagagattcctgaatcttca
tccttatacattcctgcacggcccggaaacaatgtttatctcaccattgatgaaactatc
cagtattttgtggaaagagaattgaacaatattgaaagtcagttaaagcctgctttagcg
atgattatcgtcatggatccaaaaacgggggaaattttggggatgggttctcggcctaac
tttaatcccaacgaatttgccaaatatccggcggaggttcgggaaaaaaactttgcaata
tggtataattatgagccgggttcgacctttaaaattattacttccgctgcggctttggaa
gaaggagtggttcatccccaagaccgtttttatgatccgggttatattgttgttaacggt
cgcaagataagatgctggagtaagactccgcacggtgctcagtcgtttgcggaggttatc
caaaactcttgcaaccctgggtttgtcaaggttggtttaagtttgggtaaagagcggttt
tacaaatacattagaagctttggttttggtgaaaaaacggggattgaacttcccggggag
caaaaaggtcttatcatccccgaagacaaagtaaccaatgttaaccttgccacaatttcc
attgggcagtcaatcgcagtaacgccaatccagcttatccgggcggtttgtgctgtcgcc
aacggcggtaagcttgtcgaacctcacgtagtaaaaaaaatagttgaccaagcgggaaat
atagttcttgaaaataagccccgttatttaaaacgggtgatttccgaagaaaccgccagg
accctaagagagcttttggagcgggttgttttaaagggaacgggcaccaaagcctacatt
aaaggctttcgggtggccggtaaaacgggaaccgctcaagtggtttcccctaccggtggt
tatgccccgggaaaatatgtggcttcatttgttggctttgctccggccaacgatcccaag
tttgctgctttagtggtaattgtcgaaccaagtacaggagtttattacggcggccagata
gctgctccggtttttaaaagtttaggggaggatattttaagatacatgggcgtaaagccc
caggaagatccggaaccggcgaaaaacgaaggaccaattgaagttttccccgaagaggta
agggtacctgctttagaggggttaaccctctgggaagcccagaaaaagattatcgaaaac
gggctaatctttaatgtggaagggcatgggccaaaagtagtaaagcaatcgccggagccg
ggagttatcgttcccgaaggtaccgaaattaccttgacccttggtcaggggaagggagat
accgataaagttatagttcccgagcttacaggccttacctttgatgaggttagtggaatt
ttaaagcggctgggacttggttttcgctatatcggttccggggttgcggtagaacaaaac
atcagccctggaacggtggtgccgcccgggactgtggtggaagtgaaatttaaaaattaa
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