Carboxydothermus hydrogenoformans: CHY_2091
Help
Entry
CHY_2091 CDS
T00287
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
chy
Carboxydothermus hydrogenoformans
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
chy03000
]
CHY_2091
Transcription factors [BR:
chy03000
]
Prokaryotic type
Other transcription factors
Others
CHY_2091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
PAS
HTH_50
PAS_9
PAS_4
HTH_8
Mg_chelatase
ACT_4
AAA_5
PAS_8
ACT
ACT_AHAS_ss
AAA
Diguanyl_cycl_sensor
Cache_3-Cache_2
PAS_7
AAA_2
sCache_3_3
HTH_psq
NUMOD1
HTH_Tnp_1
HTH_1
MCM
I-HmuI_NUMOD-like
HTH_Tnp_ISL3
nSTAND3
Sec8_N
AAA_7
HTH_30
dCache_1
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ABB14044
UniProt:
Q3AAC4
LinkDB
All DBs
Position
complement(1875592..1877142)
Genome browser
AA seq
516 aa
AA seq
DB search
MGTIKLSLDFEDRVGLVLDVSRVISARNLNIITFQVLPGRMFLEIEKTDKKTLKQIIDDL
KNIPKVLKVHPIEIMPYEQKEQQLRAVLDTVNEGIIAIDSHGTISICNQSCAEIFGIPVE
RVIGQNVGKLLANDIPMLKTLKTGESYNNQEIIINVEGRRLHYLTSGRPIKDRLGNIVGV
VAVLKPMSEVRELVYALTKPSLNSFNDIIYTSEKMRFVVEMAKKVARTDTTVLIRGESGT
GKELFARAIHLESPRRTKPFVPLNCAAVPESLLESELFGYVEGAFTGAKKGGKQGLLEFA
HEGTLFLDEIAELPTHLQAKLLRVLQEGKVRRIGGQEEIPVDIRIIAATNRNLEGMVREG
KFREDLYFRLNVFPLQIPPLRERVEDIEVLTYHFLNTFAKRRGIQYFEITENALNKLKAY
SWPGNVRELQNVIERALTLADDGVIEAKDIILDNPQNTYFVARTLEEAVNQVEKELIERA
LKQYPSIRQAARSLGVTHTTLRNKIKKLKLTNKVVE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgggtaccattaagttatccctggattttgaagaccgggtagggttagtcttggatgtt
tccagggttatttctgccagaaatttaaatattattacttttcaagtgcttcccggaaga
atgtttttggagatagagaaaacggataaaaaaactttaaagcaaattatcgatgactta
aaaaatattcccaaggtgttaaaggttcatcccattgaaataatgccctatgagcaaaag
gagcagcagcttagagctgttcttgatacggttaatgagggtataattgctatcgatagt
cacggtaccatttctatatgcaatcaaagctgtgccgagatctttggtatcccagtagag
agggtaatcgggcagaatgtgggtaagcttttagcaaacgatattcccatgctaaaaact
ttaaaaaccggtgaaagttacaataaccaggaaataattattaatgttgaaggtagaaga
cttcattatcttacttccggacgaccgattaaggaccgtttgggcaatattgtaggggtg
gttgcagtcttaaaaccaatgtcggaagtccgggaactggtttatgctttaaccaaaccg
tcgttaaatagctttaacgatatcatctatacctctgaaaaaatgcgctttgtggtagaa
atggccaaaaaagtagcaagaaccgataccactgtgttaatccggggagaatcggggact
ggcaaggagctgtttgcccgggctattcacttggagagcccgaggagaaccaagcctttt
gttcccttaaactgtgcggcggttccggagagtttgttggaatcggaactttttggttat
gtggaaggggcttttaccggagcaaaaaagggaggaaaacaggggcttttagagtttgcc
catgaggggacgttgtttttagatgaaattgccgaacttcctacccacctgcaggccaaa
cttttacgcgtcctgcaggaagggaaggtgcgccggattggcggtcaagaagagataccg
gtggatattagaataattgctgcaactaaccgcaacttagaggggatggtccgggaagga
aagttccgggaagacctgtattttcgcttaaatgtttttccactacaaattccgccttta
agggagcgggtggaagatattgaagtgttgacctaccattttttaaatacttttgccaaa
aggcggggaatacagtactttgaaataacggaaaatgccttaaataagcttaaagcgtat
agctggccaggcaatgtccgggaactgcaaaacgtcattgaacgggctttaaccttagcg
gatgatggagttatcgaagccaaagatattattttagataacccccaaaatacctatttt
gttgcccggactttagaagaagcggttaaccaggtggagaaggaacttattgaaagggct
ttaaaacagtatccttccatcaggcaggcagccagaagtttgggggtaacccatactacc
ttgcgcaataaaataaaaaaactaaagcttaccaataaagtagtagagtaa
DBGET
integrated database retrieval system
