Carboxydothermus hydrogenoformans: CHY_2186
Help
Entry
CHY_2186 CDS
T00287
Symbol
rexA
Name
(GenBank) exonuclease RexA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
chy
Carboxydothermus hydrogenoformans
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_2186 (rexA)
Enzymes [BR:
chy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHY_2186 (rexA)
DNA repair and recombination proteins [BR:
chy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CHY_2186 (rexA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
AAA_30
AAA_16
YtxH
Motif
Other DBs
NCBI-ProteinID:
ABB14602
UniProt:
Q3AA35
LinkDB
All DBs
Position
complement(1962047..1965550)
Genome browser
AA seq
1167 aa
AA seq
DB search
MKNWTAEQMRAITSRGNALLVSAAAGAGKTSVLVERVLSRVLTDTPPVDIDRLLVVTFTE
AAAGEMKERLGTELLKRLNEDPGNSRILEQLELLPVADISTLHSFCHKIIRKYGRVCGYE
TKFAILEGPRETYLKNKVLEEILEERYEKGDRELFALLEYLNDEKNDRNLKELILNLYHF
SRSNPEPEKWLLDSLNLFNGNWERFEDTFWYREIKSSTEMWLEYILELLGRAKSVAEKYG
QARAFSLLAEDMEKVRGLYAKLNEGYEAAKQYLSQVKFGTFSWGRGVGGKDEAKDLRDKA
KEQFETIKKRYFSWEAGNFREELRTLTSYLDPLVKLVREFSRKYQEEKRKHGFADFSDLE
HWALDILKSGVYRELREKYVEILVDEYQDINGLQEEILTYVSRDGQNLFMVGDVKQSIYR
FRWARPEIFLKKYEDFTDEKKIELSLNFRSREEIIATVNFIFKQIMKKRVAELSYDEKAF
LKKGADYLPNANCFAELHLIEGKPEEDINSNGEPEEDLTAVHREARLVAAKILKLKEEGF
KVFDRETKEFRPLQYRDIVILSRSLSNSSNIWQEELTRAGIPVYVEGAGSFLNSKEILLM
TSFLKVIDNPCQDVPLAAVLCSPVAGLTYEELWQVRKEYPEGLLYDALKNKSLGKDELSV
KSQKFLELLVEFQKLSRQISLAELVNEIYRKTNLPEIFGAYPGGEVRQANLKLLHDLAVD
FAEINGGGIYNFLTFLSQAAESEDFSPAKLIGEADDVVRVMSVHKSKGLEFPVVFVVGLG
KRFKFDYSNTVFLHSDLGFGPKFFDPEKRIRRHSIASQILSERMRRETLAEEMRILYVAL
TRAREKLILVGTVKNLAKKMAGWQSQTEALKDTLSDGQIARAGNFLDWIGPVVFREGSDL
PDCLKVEVHPQQEKIEGEQWELPEVLRVKLLTKTPFTEETDYTGQFRAGLEFNYPGLKIA
KLPAKMSVSDLKEVFSTDDVISLEDEDEVFLPGVYFEDGAMLGIVYHEFLRRIDFQGDLS
ASGLKAQGETLVAEGVLPPESREMLDFTKIARIFATPLGQRILRAREIYPEFPFTLGVKA
GEIYPEATGFSEKILVRGVIDLLALEEDGFFIVDWKTDRVTGDILNERLKEYAGQLNLYA
RAVEEITGKKVKEKYLYFINLEKEVRV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactggacagccgaacaaatgcgggctatcacctccaggggtaatgccctgtta
gtatcggctgctgcaggagccgggaaaacttcggttctggtggagcgggtattatcccgg
gtattgacggatacacctccggtagacatagaccggcttttggtggttacctttaccgag
gcagcagcgggagagatgaaagagcgtcttgggacggagcttttaaagcgtttaaatgaa
gatccgggaaattcacggattttagaacagttagaactgttgccagtggccgatatttct
accctccattccttttgtcataaaattatccggaaatacggacgggtgtgtgggtatgaa
accaagtttgcgattttagagggaccaagggaaacgtatctaaaaaataaagtcttagag
gaaattttggaggagagatacgaaaaaggggaccgggaactttttgccctgttggaatat
ttaaacgatgaaaaaaatgaccgtaacttaaaggaactaatccttaacctttaccatttc
tcccggtccaatcccgagcctgaaaagtggcttttggactcattaaatttatttaacggg
aactgggaaaggtttgaagatactttctggtaccgggaaataaaaagtagcaccgaaatg
tggttggagtatatcttagagcttttaggacgggctaaaagtgtagcggaaaagtatggc
caggccagggctttttccctcttagcagaagatatggaaaaggtgcggggactgtatgcg
aaactaaatgaggggtacgaggcggcaaagcagtacttgagtcaggtgaaatttggaacc
ttttcctggggaagaggagttgggggcaaggacgaagcaaaagacttacgggataaggca
aaagagcaatttgaaaccataaaaaaacgttatttttcctgggaagcaggtaattttcgg
gaagagttaagaactttaacctcctatcttgaccctttggtaaagttagtccgggaattt
tcccgaaagtatcaggaggaaaaaaggaaacatggttttgcggacttttccgacttagag
cactgggctcttgatattttaaaaagtggagtttaccgggaactccgggaaaaatacgtg
gaaatattggtagatgagtaccaggatataaatggccttcaggaagagattttaacttat
gtctccagagatgggcaaaatcttttcatggtgggcgatgtaaagcaaagcatttaccgt
tttcgctgggcccggccggagatttttctaaagaaatatgaagattttactgatgaaaag
aaaatagagttaagcctgaacttcagaagccgcgaggaaattatcgctaccgtaaacttt
atctttaagcaaatcatgaaaaaaagggtagcggagctttcttatgatgaaaaagctttt
cttaaaaagggagcagactatcttcccaatgctaactgttttgcggaactgcacttaatt
gaaggaaaacccgaagaggatattaactcaaacggtgaacccgaggaagatctaactgcg
gtccaccgggaagcccggctggtagcggcaaaaattttaaagctcaaagaagaaggtttt
aaagtttttgaccgggaaactaaggaatttcggcctttgcagtaccgggatattgtcatt
ctttcacgttccctcagtaactcttccaatatttggcaggaggaattgaccagggcgggg
atacctgtttacgttgaaggagctggcagctttttaaattccaaggaaattttgctgatg
accagctttttaaaggtaattgataacccctgccaggatgttcctttggccgcggtgtta
tgctcacccgttgccggtttaacctatgaagaactctggcaggttcggaaggaatacccc
gaaggccttctctatgatgctcttaaaaataaatctttaggaaaggatgagctttcggta
aaaagccaaaagtttttagaacttttagttgaatttcagaaactgtcccggcaaattagt
ttggcagagctcgtgaatgaaatataccgtaaaactaatttaccggagatttttggagct
tatcccggcggagaagtgcggcaggcgaatttaaaattgttacatgatctggcagtggat
tttgctgaaattaacggtgggggcatttataactttcttacctttttaagccaggcagca
gaatccgaggatttttcaccggccaaattaattggcgaggcggatgatgtggtccgggtt
atgtccgttcataaaagcaaagggctggagtttccggtggtgtttgtggttggccttggg
aaacggtttaaatttgattacagcaacactgtttttctccacagcgaccttggtttcggg
cctaaattttttgacccggagaaaagaatccggcgccattccatagcttcgcaaattttg
agtgagcggatgcggcgggaaactttagcggaagagatgcggattttgtatgttgccctg
acccgggccagggaaaagcttattttggttggtacggtgaaaaacttagcaaagaaaatg
gccggctggcaaagccaaaccgaggctttgaaagatactctgtccgatggccagattgcc
agagcagggaactttctggactggattgggccagtagtttttagggagggcagcgattta
cctgactgccttaaagtggaagttcatccccagcaggaaaaaattgagggagagcaatgg
gaacttccagaagtgctaagggttaagctcctgacaaaaacaccttttaccgaagaaacc
gattataccgggcaatttagggcaggtttggagtttaattatcccgggttaaaaattgct
aagcttcctgcgaagatgagcgtttccgatttaaaagaagtttttagcactgatgacgtt
atttctttggaagatgaggatgaagtatttttacccggagtatactttgaagacggagct
atgttagggattgtttaccacgagtttttgcggcggattgattttcaaggggatctgtct
gcttccggacttaaagcccagggggaaacgctggtagcggagggggttttgcctcccgaa
agcagagaaatgcttgattttacgaaaattgcccggatttttgctacgcccttgggccag
agaatccttagagctcgggaaatttacccggaatttccctttaccctgggagtcaaggcc
ggtgaaatttatccggaggctaccggtttttcggaaaaaatcctggtgcgaggggtaatt
gaccttttggctcttgaagaagatgggttttttatcgttgactggaaaaccgaccgggtc
accggggatatcttaaacgagcggctaaaagagtatgccggtcagcttaacctttacgcc
cgggctgtggaggagattaccgggaaaaaggtaaaagaaaagtatttatattttattaat
ttagagaaggaagttcgggtgtaa
DBGET
integrated database retrieval system
