Carboxydothermus hydrogenoformans: CHY_2709
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Entry
CHY_2709 CDS
T00287
Symbol
dnaN
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
chy
Carboxydothermus hydrogenoformans
Pathway
chy03030
DNA replication
chy03430
Mismatch repair
chy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHY_2709 (dnaN)
03430 Mismatch repair
CHY_2709 (dnaN)
03440 Homologous recombination
CHY_2709 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chy03032
]
CHY_2709 (dnaN)
03400 DNA repair and recombination proteins [BR:
chy03400
]
CHY_2709 (dnaN)
Enzymes [BR:
chy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHY_2709 (dnaN)
DNA replication proteins [BR:
chy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHY_2709 (dnaN)
DNA repair and recombination proteins [BR:
chy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHY_2709 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Fer4_24
Motif
Other DBs
NCBI-ProteinID:
ABB14498
UniProt:
Q3A8P3
LinkDB
All DBs
Position
complement(2398618..2399733)
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AA seq
371 aa
AA seq
DB search
MKFTCPTSILSENISLAQKAVSTKSPFPVLTGILFEANEQNSTITLTATDLQMSVETSFP
AKIIEGGSVVLASKFLGDIIKKLPETELMFEYLPNEGKCVIKYGASEVSVATYRPEEFPK
NEEVIDGESFYISGEEFSTFIKQVLFATGTDESRPVFTGVLFEIVGQELRLVASDTHRLA
FRKTFIKREDTGKNINVIIPSRTLHEAVRIFGTVDELLIKISEGQVEFSGNGIKLTSRLI
EGQFPNYQQVIPTAFKSNILINKKYFLDSLERAALLPRDKDKTPVAKFYLERENMIITSQ
SESGSIREELPISLEGEEFTVAFNTRYLIDVLKVLETEEIYLSLTGPLNPGVVKPVNDEN
YLCLVLPVRPS
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttacctgcccaacttccattctttccgaaaatatctctttagcgcaaaaagca
gtttccactaaaagcccatttcctgttttaaccggtattctttttgaagctaacgaacaa
aatagcaccattaccctgacggccaccgatttacaaatgtccgttgagacttcctttccg
gcaaagataattgagggaggcagcgtggtccttgcttcaaagttccttggagatataatt
aaaaaacttccggaaacggagttaatgtttgaatacctgccaaatgaaggaaaatgcgta
ataaaatacggtgcatcggaagtatcggttgccacttaccggccggaggagtttcctaaa
aatgaagaagttattgatggtgaaagcttttatataagcggggaagaattttccaccttt
attaaacaagttctgtttgccacgggaaccgatgaatcaagaccggtatttaccggagtt
ttatttgaaatagtcggtcaggaacttaggttagtagccagtgatactcaccggcttgcc
tttagaaaaacgtttattaaaagagaagacaccggcaaaaatattaatgtgatcattccc
agcagaaccttacacgaggcagtaagaatctttggtaccgttgacgaactgttaataaaa
ataagcgaagggcaggtagaattttctggaaacggtattaaacttacatcccgcttaatt
gaaggacagtttcccaattatcaacaggtaatacccaccgcttttaaatctaacattctc
ataaataaaaaatattttttggactcgctggaaagggcagcgttacttccgcgggataaa
gacaaaactcccgttgccaaattttatttggaaagggaaaacatgattattacaagccag
tccgagtccggttctatccgggaagaattaccgatatcgttagagggggaagagtttacc
gtagcttttaatacgcggtacttaattgatgttttaaaagttttagaaacggaggaaatt
tatttaagtctaaccgggccactaaatccaggagtggtaaaaccggttaacgatgagaac
tatctctgtttggtactcccggttagaccttcatag
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