Calycomorphotria hydatis: V22_01690
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Entry
V22_01690 CDS
T09810
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
chya
Calycomorphotria hydatis
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chya03016
]
V22_01690 (rnd)
Enzymes [BR:
chya01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
V22_01690 (rnd)
Transfer RNA biogenesis [BR:
chya03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
V22_01690 (rnd)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
QDT62971
UniProt:
A0A517T3Q0
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Position
complement(180656..181855)
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AA seq
399 aa
AA seq
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MSSRLITKQAKFEQLCDHIRKAGLVAFDTEFVSEYTFRPELCLLQFATKERVEGVDPFEV
TDLTPWWELMTDDKTTVVVHGGQAEVRFCIDLFGSPPCNMSDVQLTEGLLSRSYPLGYES
LVSRVLGKKLGGSETRADWRRRPLTSRQIDYALDDVTHVLPIWEKQKKLLRKRGRKDWAE
TEINRMIDDINVDLNRAPWQRVSGLHRLKRRDFAVAVKIAEWREGEAIERNRPPRRILRD
DLVVDISRRQPGTLKELESTRDFNRMEAKRSSAGLLDAILAGQEMPEEDIPTPPEADRPD
KSPDEHMLGQLLGIALSSRCAEMEVSRQLVGTSADLRHLVRWHLYGEQNGTVPRLASGWR
AEVCGDLLTDLMDGKISLRVADPNSDHPLVFERDGEEAE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacggttgatcaccaaacaggccaagtttgagcagctctgcgatcacattcgc
aaagccgggttggtggcgtttgataccgagttcgtttcggaatacaccttccgcccggaa
ctctgcctcctgcagttcgccaccaaagagcgtgtggaaggcgtcgacccgttcgaagta
accgacctgactccctggtgggagttgatgaccgatgacaaaaccaccgtcgtggtgcac
ggcggacaggcggaagtccggttctgcatcgatctgttcggctcaccgccctgcaacatg
agcgacgtgcaactgacggaaggtctgctcagccgcagttatccgctcggatacgaatca
ctggtttctcgcgtgttgggcaaaaagctcggcgggagcgaaacacgggctgactggcgt
cgccgccccctgacctcccggcaaatcgattacgccctcgatgacgtcactcatgtgctg
ccgatttgggagaagcagaaaaaactactaaggaaacgcggtcgcaaggattgggcggaa
accgaaatcaaccgcatgatcgacgatatcaacgtcgatctgaatcgagccccctggcag
cgtgtctcggggctgcaccgactcaaacggcgagacttcgccgtcgcggtgaaaattgca
gaatggcgtgaaggcgaagcgattgagcggaaccgaccgccaagacgaattctgcgtgat
gacttggtcgttgacatctcccgccgacagccgggaacgctgaaagaactggagtcgact
cgcgacttcaatcgtatggaagcgaagcggagttccgccggtctgctcgatgcgattctg
gccggacaggaaatgccggaagaggacattcccactccccccgaagccgaccggccggac
aaaagtccggacgagcacatgctgggacagcttctgggaattgcgttatcaagccgctgt
gcggagatggaagtctcccgccaactggtaggcacgagcgctgatttacggcatcttgtg
cggtggcatttatacggtgagcagaacggcacggtaccgcgactggcctcaggctggcgg
gcggaagtgtgtggcgatctgctgaccgacttgatggatggaaaaatttcactgcgggta
gccgaccccaatagcgatcacccattggtgtttgaaagggacggcgaggaggcggaatga
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