Calycomorphotria hydatis: V22_03840
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Entry
V22_03840 CDS
T09810
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chya
Calycomorphotria hydatis
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chya03032
]
V22_03840 (topA)
03400 DNA repair and recombination proteins [BR:
chya03400
]
V22_03840 (topA)
Enzymes [BR:
chya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
V22_03840 (topA)
DNA replication proteins [BR:
chya03032
]
Prokaryotic type
DNA Topoisomerases
V22_03840 (topA)
DNA repair and recombination proteins [BR:
chya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
V22_03840 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QDT63166
UniProt:
A0A517T459
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All DBs
Position
complement(435502..438153)
Genome browser
AA seq
883 aa
AA seq
DB search
MVANAKKTLVIVESPAKAKKIQGFLGPNYTVLASYGHVRDLPSKAAEIPESVKKESWSTL
GVNVTQDYEPLYVVPGDKKKRVKELKDALKNADELLIATDEDREGESIGWHLVQLLKPKV
PVKRMVFSEITKSAILEAIEQTRDLNEDLVSAQETRRVLDRLYGYTLSPLLWKKIARGLS
AGRVQSVAVRMLVERELERAAFKSGTYWDLTADLKTGEGSEFQALLHTVDGKRVASGRDF
DETTGKLKADANVTLLDEDEAKKLLEKIQTADWSVASVETRDQKRNPYPPFTTSTMQQEA
NRKLNLGARQTMQIAQKLYEDGHITYMRTDSVALSNDAVKGIRGMIDKRYGSEFLSPSVR
TFANKSKNAQEAHEAIRPAGNEMKTADELGLRGADARLYDLIWKRTVACQMAEARLKFQT
VTIATADAEFRATGRHVEFPGFFRAYVEGSDDPEAALDDSESALPPLNQGEGLKPQKIEP
VSHETKPPARFTEASLVRQMEAEGIGRPSTYASIISTIQDRGYCEKQGSQLVPTFTAIAV
NKLLKNHFPDLVDYGFTADMEQKLDDISNGQQDRLPYLNRFYGGPEGLDSQVKTKEEGID
PRVACTVKFDGVGPDVRIGRYGPFFEADDNGERITASIPNGIAPADLNDELAEEIIELKK
QGPQSLGVHPEEGLPVYVKVGPFGPYVQLGDVTDETPKPKRTGIPKSVDPNSLDLDKAIQ
LLDFPKRLGHHPETNKVVNVGIGRFGPYILHDRKYGNFDKKTHKFEWEGQEYDIFNVTLP
VAVEMLKLSKSRGAAKPLKELGDHPDDGKPIGIYEGKYGPYVKHGKLNATIPKEREINDV
SLEEAVRLLEEKAAKKGVKKKSAKKKATKKKSAKKKAAKKKSS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
ttggttgccaacgccaaaaaaacactggtcatcgtcgaatcccctgcaaaagccaagaaa
attcaaggctttctgggaccgaactacaccgtgctcgccagttacgggcatgtgcgggat
ctgccgtccaaggcggcggaaattcccgagtcggtcaaaaaagagtcgtggtcgacactt
ggggtgaacgtcacacaggactatgaaccgctctacgtcgtccccggcgacaagaaaaaa
cgggtcaaggaactcaaagacgccctcaaaaacgccgatgaactgctgatcgcgaccgac
gaagaccgcgaaggagagtcgatcggctggcacctcgtgcaacttctcaaaccgaaagtc
cccgtcaaacggatggtcttctcggaaattacgaaaagcgccatcctcgaagcgatcgaa
caaacccgcgacctcaacgaagacctcgtctccgcccaggagacgcgccgcgtcctggat
cggctgtatgggtacacgctgagcccgctgttgtggaagaagattgcacgcgggttgtcc
gcagggcgggtgcagtcagtcgcggtgcggatgctcgtcgaacgcgaactcgaacgggcg
gcgttcaaaagcggtacctactgggacctgaccgccgacctcaaaacgggtgaaggcagc
gagttccaggcactcctccacaccgtcgacggcaagcgggtcgcctccggtcgcgatttc
gacgaaacaaccggtaagctcaaagccgatgcgaacgtgacgcttctcgacgaagacgaa
gcgaagaaactgctcgagaaaatccaaactgcggactggtcggtcgcttccgtcgaaaca
cgcgaccagaagcggaatccctatccgccattcaccaccagtacgatgcagcaggaagcg
aaccgcaagctgaatctcggtgcccgccagacgatgcagatcgctcagaagctttacgaa
gacgggcacatcacttacatgcgtaccgacagtgtcgcgctgtcgaacgatgccgtgaaa
ggcatccgcggcatgatcgacaagcgctacggcagcgaattcctcagcccttcggtccgc
acctttgcgaacaaatcgaaaaacgcacaggaagctcacgaagcgattcgtcccgctggt
aacgagatgaaaaccgccgacgaactcggcctgcgtggagccgatgcccggctgtacgac
ctgatctggaaacggaccgtcgcctgtcagatggccgaggcccggttgaagtttcaaacc
gtcaccatcgcgaccgcagacgccgagttccgtgcgaccggtcgccacgtcgaattcccc
ggcttcttccgtgcgtacgtggaaggttccgacgatcccgaagcggcactcgacgattcc
gagtcggcattgccaccactcaatcagggtgaaggactcaagccgcaaaagatcgagccg
gtttcccacgaaaccaaaccgcccgcgcgattcacggaagcgtcgcttgttcgtcaaatg
gaagctgagggcatcggtcggccatcaacttacgcgagcatcatcagcacgattcaggat
cgcggatactgcgaaaaacagggcagccagctcgttcccaccttcaccgcgatcgccgtc
aataaactgctgaagaaccatttccccgatctcgtcgactacggtttcaccgccgacatg
gaacagaagctcgacgacatctccaacggccagcaggaccgcctgccgtacctcaaccgc
ttttacggcggtccggaaggtctcgacagtcaggtgaagacgaaggaagagggcatcgac
ccacgtgtcgcctgcacggtgaagtttgatggcgtcggtcccgatgtccgcatcggtcgg
tatggaccgtttttcgaagcggatgacaacggcgagcggatcaccgcctccatccccaac
ggcatcgccccggcggacctcaacgacgagttggccgaggagattatcgaactgaagaag
cagggcccgcaaagcttgggcgtgcaccctgaagaaggcctgccggtctacgtcaaagtc
ggccctttcggcccctacgtgcagctgggcgacgtcaccgacgaaacacccaagccgaaa
cggaccggcattcccaagagcgtcgatcccaactcgctcgacctcgacaaagcgattcaa
ctgctcgattttccgaaacgtctcggccatcaccccgagacgaacaaggtggtcaacgtc
ggcatcggtcgtttcgggccgtatatcctgcacgaccgcaagtacggcaacttcgataag
aagacccacaagttcgagtgggaaggccaggagtacgacatcttcaacgtcacccttccg
gtcgccgtcgagatgttaaagctctccaagagtcgcggtgccgccaaaccactcaaagaa
ctgggcgaccaccccgacgacggcaagcccatcggcatctacgaaggcaaatacggcccc
tacgtcaaacacggcaaactcaacgccacgatccccaaagaacgcgaaatcaacgacgtc
tccctcgaagaagccgtccgcctcctggaagaaaaagccgccaagaaaggcgtgaagaag
aagtccgcaaagaagaaagcgacaaaaaagaagagtgccaagaagaaggcggcgaagaag
aaaagttcttaa
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