Calycomorphotria hydatis: V22_16620
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Entry
V22_16620 CDS
T09810
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chya
Calycomorphotria hydatis
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chya03009
]
V22_16620 (rimO)
Enzymes [BR:
chya01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
V22_16620 (rimO)
Ribosome biogenesis [BR:
chya03009
]
Prokaryotic type
ribosomal protein modification factors
V22_16620 (rimO)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QDT64428
UniProt:
A0A517T7S6
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Position
1933494..1934924
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AA seq
476 aa
AA seq
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MSLLPIIDPSAASLTTEDSEQPTKGTYAFVSLGCPKNLVDSEKMLGHLAVDGYSLVSDPD
GADFVIVNTCGFIDSSRAESRSVIDDMLDLKRAGRTKGVIVAGCLPERVGGANLREEFPE
VDHIVGVFARDEISRVADRLVGGVKEQREVFRPAPIRALDDRQRLRITPQHYAYLKISEG
CNRTCTFCSIPMMRGKHATKPIEEIVAEARELAADGVRELILVAQDTTYYGIDLYGEMKL
VELLDALEQVDGIQWIRMMYLYPVNFTDQLIEKITTSSKVIPYLDMPLQHINSRVLKRMS
RRVNQDKTIALVRKLRASISNLVLRTTFIVGFPGETDAEFEDLVDFVEEARFERMGVFPY
SIEEGTPAVKLDGHLPDDVKTARYEHLMGTQQQIAFDFAESLIGYELDVHIDGVTENGLL
IGRTYADAPDIDASVYVGGDESLVGQMVPVELTESDGYDWGGEAIVATTDDAGATS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttgcccattattgatccctctgcagcatcgctcacgaccgaggactccgaa
cagcccaccaagggcacgtacgcgttcgtcagcctgggctgtcccaagaatctggtcgac
agcgaaaaaatgctcgggcacctcgccgtcgacggttattcgctcgtttccgatccggac
ggggccgacttcgtcatcgtgaatacctgcggctttatcgacagcagccgggcggaatcg
cgttctgttattgatgacatgctcgatctgaaacgcgcgggtcgcaccaagggcgtgatt
gtcgccgggtgtctgcccgagcgtgtcggtggcgcgaatctgcgagaggaattccccgag
gtcgatcacatcgtgggtgtctttgcccgggatgaaatcagcagggtcgccgaccgactt
gtgggcggggtgaaggaacagcgggaagtcttccgccccgcaccgattcgtgctcttgat
gatcgacaacggcttcggatcacgccgcagcattacgcctatttgaaaatctccgaaggc
tgcaaccgcacctgcaccttctgctcgatccccatgatgcgcggcaaacacgccaccaaa
ccgatcgaagaaattgtcgcggaagctcgcgaactggccgctgacggcgtgcgagagttg
atcctggttgcccaggacaccacgtactacggcatcgacctctacggcgaaatgaagctg
gtcgagttgctcgatgctcttgaacaagtcgacggtattcaatggattcggatgatgtac
ctctacccggtcaacttcaccgatcaattaatcgaaaaaatcacgacgtcgtcgaaggtc
atcccctatctcgacatgccgctgcagcatattaacagtcgtgtcctcaaacgcatgtcc
cggcgagtcaatcaggacaagacgatcgctttggtgcgtaaactacgtgcgtcgatttcg
aacctggtgttacgcaccaccttcattgtcggcttcccgggtgagaccgatgccgagttc
gaagacctggtcgacttcgtcgaggaagcccgctttgagcgtatgggtgtgttcccttac
tccatcgaagaaggcacacccgccgtcaaacttgatggccatttgcccgacgacgtgaag
accgcccgctacgaacacctgatgggtacgcagcagcaaatcgccttcgacttcgccgag
tcactcatcgggtatgaattggatgtgcacatcgatggcgtgacggaaaatggtttgctc
atcggtcggacttatgccgatgctcccgacatcgatgcgtcggtctatgtcggtggcgat
gaatccctggtcggccagatggtgccggtcgaactgaccgaaagcgacggctacgactgg
ggtggtgaagccattgtcgccaccaccgatgatgcgggagccacgtcgtga
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