Calycomorphotria hydatis: V22_17180
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Entry
V22_17180 CDS
T09810
Symbol
rpsA_1
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
K03527
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase [EC:
1.17.7.4
]
Organism
chya
Calycomorphotria hydatis
Pathway
chya00900
Terpenoid backbone biosynthesis
chya01100
Metabolic pathways
chya01110
Biosynthesis of secondary metabolites
chya03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
V22_17180 (rpsA_1)
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
V22_17180 (rpsA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
chya03011
]
V22_17180 (rpsA_1)
Enzymes [BR:
chya01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.7 With an iron-sulfur protein as acceptor
1.17.7.4 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase
V22_17180 (rpsA_1)
Ribosome [BR:
chya03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
V22_17180 (rpsA_1)
Bacteria
V22_17180 (rpsA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
QDT64484
UniProt:
A0A517T7X8
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All DBs
Position
complement(2004145..2006013)
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AA seq
622 aa
AA seq
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MISDETRPEDEQTTPSAQESHTALQTEQAPAEQEQASDTSEETTSSEEQSPSAEQTQAPP
EVEEASATQEEPAVEAASPSEETAPAEAEAATPQPQLEEPTAAPVEEASTEPQPTAEVTE
TTEPSAPAATEETPAPTAEVPTTEPPATAAVEEKAEEAKPEEASRPRVKLNPTMPADTAK
AVPSLGDAAGESGPQGPVEVALPDSEQLDQAMEAELEAAMSGAAKPEQPAAPAAESEESK
EAAEPEGLTPGKKVTAVVQSVGEENVFFEIKDERSTGIAQLRQFPKEKPPEAGQSLTMFV
DAINEEEGTINLSPPRAKRKPSGNWDAVAEGQIVDCMVTKSNKGGLEVSISNLRGFLPAS
QVEMGFVENLDSYVGQKLTVQIIEVKPQKRNLVVSRRAYLRAEQDEQAGKVWEELSVNQT
VTGTVKTLKDYGAFIDLGGVDGFLHVGEISWNRIGKPADMLQVGQQIEVKILKLDKEAKK
IGLGMKQLIQNPWAHAEEKYPVESTVSGKVTRTTEFGAFVELEQGVEGLIHISELDYRRV
ATVNEVLNVGDTVDAQVLSVEKNRKRIALSVKALKPKPEAPAQEAAAEQQREPYKRKRKG
PLRGGTGSSEGGGLFGNPNDFS
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgacgagacccgtccagaggacgagcaaacgactccttccgcacaggagtcc
cacacggcattgcagaccgaacaagctcccgcagagcaggagcaggcttcggacacgtcg
gaggagacaacttcttccgaagagcaatcgccatccgcagaacaaacacaagcaccgccc
gaagttgaagaagcttccgcgacgcaggaagagcccgccgtcgaggctgcgagcccttcc
gaagaaactgcgccggctgaagcagaagctgctactccacaaccgcagttggaagaacct
acggctgctccggttgaagaagcttctactgaaccacagccaaccgcagaagtaaccgaa
accactgagccatccgcaccggctgccacagaggaaacaccggcaccgacagcagaagtg
ccgaccactgagcctcctgccactgccgcagtggaagagaaggcagaggaagcaaaacca
gaagaggcatcacgtcctcgcgtaaagttgaatccaaccatgcccgccgatacggcgaaa
gcggttccttcactcggcgacgctgcgggtgaaagtggtccgcaaggtccggttgaagtt
gctttgccggattcggaacaactcgatcaggcgatggaagccgagttggaagcggcgatg
tccggcgctgccaagccagagcagccagccgcccccgcagccgaaagtgaagagtcaaaa
gaagcggctgaaccggaaggcctcacaccgggcaagaaggtgaccgccgttgtgcaatcg
gtcggcgaagaaaacgtctttttcgaaatcaaagacgagcgcagcaccgggattgcacag
ctgcggcagtttcccaaagagaagccgccggaagctggtcagtcgctgacgatgttcgtc
gatgccatcaacgaagaagaaggcacgatcaacctcagtccgcctcgagcgaaacgcaaa
ccgtccggcaactgggatgcggttgctgaaggtcagattgtcgactgcatggtcaccaag
tcgaacaaaggtggtctggaagtcagcatcagtaacctgcggggttttctgcccgccagt
caggtcgagatgggctttgtcgaaaacctcgacagttacgtcggccagaaattgacggta
cagatcatcgaggtgaaaccgcaaaagcggaatctcgtcgtcagccgtcgcgcttatctg
cgtgcggaacaggatgaacaggccggcaaggtttgggaagaactttccgtcaatcaaacc
gtgaccggaaccgtcaagacgttgaaagactacggcgcattcatcgacctgggtggcgtt
gatggattcctgcatgttggcgaaatcagctggaatcgcattggcaagccggcggacatg
ctgcaggtcggtcagcagattgaagtcaaaatcctgaagctcgacaaagaggccaagaaa
atcggccttggtatgaagcaactcattcagaacccgtgggcacatgcggaagagaagtat
ccggtcgagtcgactgtctccggcaaagtgacccgcaccaccgagtttggcgctttcgtc
gagttggagcagggggttgagggactcatccacatcagtgaactcgattatcgtcgcgtc
gcgacagtgaatgaagttctcaacgtgggtgatacggtcgacgcgcaggttctctcagtc
gagaagaaccgcaaacgcattgcactctcggtgaaggccctcaagccgaagcccgaagcc
cccgctcaggaagcagctgctgaacaacaacgggagccctacaagcggaaacgcaaaggt
ccgctgcgtggtggaacgggatcgagcgaaggtggcggtctgttcggcaaccccaacgac
ttttcttaa
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