Calycomorphotria hydatis: V22_21540
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Entry
V22_21540 CDS
T09810
Symbol
rhsC
Name
(GenBank) Putative deoxyribonuclease RhsC
Organism
chya
Calycomorphotria hydatis
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Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
PASTA
DUF6531
Motif
Other DBs
NCBI-ProteinID:
QDT64909
UniProt:
A0A517T980
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Position
2509214..2514976
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AA seq
1920 aa
AA seq
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MRQTLARTILWLLIYSLLLPPSVLTAQEQESSPPVKTATVPNLVGSAAPTAVNLLAAVGL
LPSVKLGEPATDFESAYQVYQQSIPHGVEQRQGSVVEITVYAPPLPMVDEVIESSDNKPL
TERLISVDARPILDESIQNYDFRTGLFSLEETDIRIPAGRDELVLKRYLAMDSFSENQFA
GNWRTNWHNRVQFGEDFAVVNEGAGPRGYSAVNSGLLYRAADGTELEWRSGFVERRLRDG
SREFYDGEGRLLSVELRPGSHVILKYDKDNRLDRVTGPYHAWLQFDYDSLNRIIRVEASN
GAIANYTYGDSHGRTDPNKGVSASTTRYGYDPAGRLTSVGTAQHGTTEFKFDSKNRLISR
SWADGTGERYEYNDARGVWKHINPEGQVTVISWRPDRRAVAIQGPQGATSVAKFDAQGRT
IYASGPDGREASIAYDALGRTASVTGTQLGTVKFTYEKDSLKPIQEVKTDGQEIDYKYDE
AGNLTAVANSLNPPDQTRMEYDENGQLFRATDQHGNTSTYHYSERGFLESVVDSANRKTE
YLYDSLGNMTQVTDPLGRVSKFQYDELGRQIGETNASGAKTEYHYNERGLLARTIDPLGN
STSYEYDARGRLISETDPLQRVTKYKYTPDGKLSSLEAPGGLTTSYRYDASGNLIGTVSP
EGLNKGYLYDVAGRLAATIFENGAAESYQYNADGKPVRVSRNDGGTENFEYDNNGRVLEV
EQEDGTRKQFEYNERGQLSAAWENAEEKRYLHYDQLGRLSRISSGNATLVSYSYDQLGRK
QEERYGTGRSVTYEYDDADQIVAIDDSVNGKTTISRNGSGQPEILIRDDAVMRLEYDANG
NLIKQINPDGGQLEWIYDAASELVVKQDAIGQQVALKRDNAGRLAQVTHPNGATTIYEYE
LSDKPQKVTGPDGRSYELHFNEQGRVQSSVDPSGRVINYGYDKVGRLTSKEMSDGTVVQY
GYDEKGRLVSVDDGKFPVHYLYDKFSRKRRISYPAINQQLDLTYDFEGRLHKQTVKNGET
IKYQYNTFDQLKTISFGRRDFQLEYDDGERLSTIHYPNGVRGIFEHDQHGNVSKMVYLTK
GLIPLFGRVHEYDGLSNLVKSTSLKGESVEYTYDSIGQLLSENRGDSQAQTSYTYLLGGN
RDVMRRGEKQVQYEYDTADKLLKANDTEYRYDKNGNLIEKVSPDGTTAYHYDVFDQLIKV
AQPDGTIVEYGYSPTNVRVWRSVNGVKTYFVSDGTHVVATLDNNQNITEQYVFGESVDNV
LAAIDSNANAKFFLGDRLGSVRQVLDEAAEHLCSIDYDAFGNILSQSGDYKSPFSYTGRE
WDTEAGLYYYRARYYDPEIGRFLGVDPEGIDPEDPLSCNAFLYAINNPLKFTDPFGTDPR
TGGFNFGGWEKMIGETQGIENKISKLRHEINTADIKARNMEMFRTSDPGKYQFLGGDEQR
AFSTAQRDHLQRNLNQLRKVDPRPRFSSSSYVDQPGTSSTSGSTARGGTSGSSTRANSDY
RPPANDTMATNNHSGGAPLRPTGRIDGWQPRGGTVTGVRPAPSVGSGASGLRGASTFSPS
AGMTPMESAANTMRSAGRSLGRGFDRLANGARRVGDFAARHSGKLTAGYHGVMLARAVKN
AHPEERPNAAGRYIFSAAMGQAAVTAVASISAATGGAATLPLVAALGVGLWGAMIGKIIY
DKISPPGKYKEKEAAKPTLPVATPPHDESSHARPRPRPVPMSTARSAPVIPNPVDPAVSD
KDGFIPQPNFGTDKKEEGDQPEEPEGPQEPEQPEEEKDDFDREAATAALNGNDSGSDDIE
DYRDLAADLIMEILEKGPTLGDYDKAREIDRYATERERREAEARRRQQEIARIRAAQAAR
NRQIYINRQRNQQRVMNDLANGLAGLGAALDNYYGSQNNWGNEGHHHGPGGTDNNYWGGW
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
gtgagacaaacattagcgcgtacaattctttggctactgatttactcactacttctgccc
ccttctgtattaaccgcgcaggagcaagagtcgtcgcctccagttaaaacggcgacggtc
ccaaacctcgttggttccgctgcgccaacagccgtcaacctactggccgcagttgggcta
ctcccatccgtcaagcttggcgagcctgccacagattttgagtcagcctatcaggtctat
cagcaaagcattcctcacggtgtcgagcagcgtcaaggcagcgtggttgaaatcactgtt
tatgcgccgccattaccgatggttgatgaagtaattgaaagtagtgacaataagcctcta
acggaacggctgatatcggtcgacgcacgaccgatactcgacgagtccatccagaattat
gactttcggacggggttgttctcacttgaggaaactgacatccgaattcctgctggtcgt
gatgaactggttctaaaacgctatctggcgatggactcattttcagagaatcaattcgcc
ggtaactggaggaccaattggcataaccgtgtgcaattcggggaggactttgcggttgtt
aatgaaggagctgggccacgtggttacagcgctgttaacagcggccttctgtatcgtgct
gcagatggaacggaattggagtggcgttcgggctttgttgaacgtcgcctgagggacggc
tcacgtgaattttatgatggtgaaggtcgactgctatcggtggagttacggcctggttca
catgtgattctcaaatacgacaaagataatcgccttgatcgtgttacaggcccttatcat
gcctggctgcaatttgactacgactcattgaaccgaatcatacgggtcgaggcatccaat
ggcgcgatcgccaattacacatatggtgattcacatggcaggacagatccgaataaaggt
gtatcagcttcaacaactcggtatggctatgatccagcagggcgattgacatcggtaggc
accgcacagcacggaacgaccgagttcaagtttgattctaaaaacagattaatcagtcgt
tcctgggcggatggcactggcgagcgatatgaatataacgacgctcgtggagtgtggaag
catattaatcctgaagggcaggtgacagtcatctcgtggaggcctgatcgccgtgcagtt
gctattcaggggccacagggagccacgtctgttgccaagttcgatgcacaggggcgaaca
atctatgccagtgggccagatgggcgagaagcgagtattgcctacgatgcattggggaga
acggcaagcgttacaggtactcaactggggaccgtcaagtttacgtatgaaaaggattct
ttaaagccgattcaagaagtaaaaacagatggtcaagagattgattataagtacgatgag
gcgggaaatttgactgctgttgcgaacagtctcaatccacctgatcagactcgtatggaa
tatgacgagaatggccagttgtttagagccacagatcagcatggcaatacttctacatat
cattacagcgaacggggcttcctcgaaagcgtcgtcgattccgcaaatcgaaaaacagaa
tacttatacgacagcctggggaatatgactcaggttactgatcccctgggccgagtgagc
aaatttcaatatgacgagcttggccgccaaattggcgaaacgaatgccagtggtgcgaaa
acagaatatcattacaacgagcgaggtttgctggcccgaaccattgatccactcggtaat
tcaacgagctatgaatacgatgctcgtggtcgactcatcagcgagactgatccgttacaa
cgggtaacaaaatacaaatatactccagatggaaaactgtcctcgctagaggcaccgggc
ggtctcacaacaagttaccgttatgacgccagcggcaatctgattggtactgtttcaccg
gagggacttaataaaggatatctttacgacgtggcaggtcgcctggcagccacaatcttt
gagaacggtgctgcggaatcgtatcaatacaatgcagatggtaagcctgttcgtgtttca
agaaacgatggcggtacagaaaacttcgaatatgacaacaatggacgagtgttggaagtt
gaacaggaagacggtactcgcaagcaatttgaatataacgagcgaggtcaattatctgcg
gcctgggaaaacgctgaagaaaaacggtatctgcattatgatcaactcgggcgactcagc
aggatttcatcaggcaatgctacattggtttcatacagctatgatcaattgggccgaaaa
caggaagagcgatacggtaccggccgatctgtgacttacgagtacgacgatgctgatcag
atcgttgctatcgacgacagcgttaatggaaagactacaatcagcagaaatgggtctggt
caaccggaaatactcatcagggacgatgccgttatgcggctcgaatacgacgccaatgga
aatttgattaagcagatcaatccggatggtggtcaactcgagtggatttatgacgctgcc
agcgagcttgtagtcaagcaagatgcgataggacagcaagttgcactaaaacgagataat
gctggcagactcgcgcaggtgactcacccgaatggtgcgactacaatttacgagtacgaa
ctaagtgataagccacaaaaggtaacaggtcctgatggacgctcgtacgagttgcacttt
aatgagcaggggcgagtacagtcatcggttgatccctcgggacgagtcatcaactacggg
tacgataaggttggccgtttaacatcgaaagagatgtcggacggaactgtcgtgcaatac
ggttatgatgaaaagggtagattagtctcggtagatgatggtaagttcccggtgcattac
ctctacgataaatttagccgaaagaggcgaatatcttacccggcaatcaaccaacagctc
gacttgacgtacgattttgaggggcgtctccataagcagactgtgaaaaatggtgaaacc
attaagtatcagtacaacacttttgatcaactgaaaacgattagttttggccgccgagat
tttcagctggaatacgatgatggggagagattgtcaacgattcattaccccaatggcgtt
cgcggtatatttgagcatgatcagcatggcaatgtgtcgaaaatggtctatctcactaag
gggttaattccgttattcggaagagttcatgagtatgacggattgagtaatctcgttaag
tcgacaagcttgaagggagaatctgttgagtacacttacgattcaattggtcaattactc
agtgaaaatcgcggtgacagtcaggcgcaaacttcttacacctatctgctcggtggaaac
agagatgtgatgaggagaggggagaagcaggtacaatacgaatatgatactgctgataaa
cttctgaaagctaacgacacagagtatcgatatgacaagaatggaaacttgattgaaaaa
gtttcacctgatgggacaacagcctatcattatgatgtgttcgatcaattgattaaggtg
gctcaacccgatggaactattgttgagtacggctattcgccaaccaatgttcgggtttgg
cgctctgtcaacggtgtgaaaacatacttcgtctcagacggcacccatgtagtagcgaca
cttgataataatcagaatattactgagcaatacgtatttggcgaaagtgtcgataatgtg
ttggcggccatcgatagcaatgctaatgcgaagtttttcctcggcgaccgcttaggtagt
gttcgccaggtgttagatgaggctgccgagcatttgtgttcgattgattacgatgctttt
ggtaatattctttctcaatccggcgattacaaatcaccattcagctacacaggccgcgaa
tgggacactgaagcagggctctattattatcgggcacgctattacgacccggaaatcggt
cgttttcttggcgtcgatcctgaaggaattgatccggaagaccctttgtcatgtaatgcc
tttctctatgcgattaacaatccgctgaagtttacagacccatttggtactgatcctaga
accggtggctttaacttcggtggctgggaaaagatgattggtgagacacaagggatcgaa
aataagatttcaaaacttaggcacgaaattaatactgcggatatcaaagcccgcaatatg
gagatgtttagaaccagcgatccgggtaaatatcaattcctgggaggagatgagcaacgt
gccttctcgaccgcacaacgcgaccatctgcagcgaaatctaaatcagttaagaaaagtc
gatccacgcccacgtttttcctcatcttcgtacgtcgatcagccgggaacgagttctact
tcaggtagcactgctcggggaggaactagcggttcatcaactcgtgcaaattcagactat
cgtccacctgcgaacgatacgatggcgacgaacaatcatagtggtggagctcctcttcgt
cctacgggaagaattgatggttggcagccacgaggaggaacggtaacgggtgtgcgacct
gcaccatcggttggctctggagcatccggcttaagaggtgcatctacatttagcccttcc
gctggaatgactcctatggaaagtgcggccaacacgatgagatcggctggtcgttcatta
gggcgcggatttgatcgtttggcaaatggagctaggcgagtaggagatttcgcggcacgt
cattcaggaaaactgactgctggttatcacggggtcatgctcgcccgtgcagtgaagaat
gctcatccagaagaaagaccaaatgctgctgggcgttatatattttcagcagcaatgggc
caggccgcagtcactgctgttgcatcaatatcggcagcaaccggtggtgcggctactttg
cctctagttgccgcacttggtgtaggtttgtggggagcgatgattggtaaaatcatatac
gacaaaatatcaccacccgggaaatataaagaaaaggaagccgcaaagccaactttgccc
gttgcaactcctccccatgatgagtcttctcacgctcgcccacgtcctcggccagtgcca
atgagcacggctaggtctgctccagtaattccgaaccctgttgatccggctgtttcggat
aaggatggctttataccacagccaaatttcgggactgataaaaaagaggaaggcgatcaa
cctgaagagcctgaaggacctcaagagcccgaacagccagaggaagaaaaggatgatttc
gaccgagaggcagcgacagcggcgttaaatggaaatgatagcggtagtgatgatattgaa
gattaccgagatctagcggctgacctcatcatggaaatactagaaaaaggccccacgctg
ggtgattatgataaagcaagggaaattgaccggtatgctaccgaacgcgaaaggcgagaa
gcagaagcgcgtcgtcgtcaacaggaaatcgcacgcatcagggcagctcaggctgcaaga
aatcgtcagatctacattaatcgacagagaaatcaacagcgtgtgatgaatgatctggcc
aatggattggcaggtttgggagcggcattagacaattattacggatcacagaataactgg
ggaaatgaaggccatcatcatggccctggcggaacagacaataattattggggtgggtgg
taa
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