Calycomorphotria hydatis: V22_22540
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Entry
V22_22540 CDS
T09810
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
chya
Calycomorphotria hydatis
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chya03400
]
V22_22540 (addB)
Enzymes [BR:
chya01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V22_22540 (addB)
DNA repair and recombination proteins [BR:
chya03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V22_22540 (addB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
ADDB_N
UvrD-helicase
UvrD_C
AAA_19
DUF6183
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QDT65008
UniProt:
A0A517T9G6
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All DBs
Position
2651719..2655048
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AA seq
1109 aa
AA seq
DB search
MSRVELLIGVAGTGKTTRLLDRYVDVLQQDSADGRLATSLWLTPTRRTRKQIRGELLKRS
ERPILQPNVLTFSDFADAIVQRANPLMRQLDSIGRLQILRDVIEELAVAGRLPHFAPIVE
TPGFLRVVSGVISELKREEIWPEHFETDGPKAKSMAGQRGQWELVRIYTAYQRRLKHPHD
QDDQGELYDAEGRFWSARDFLNAGHREPFANLQTVFVDGFSDFTKTQIEILSLLANFVGE
VKITLPGEESNEHPELFLKSKMTRTALLRAFGSQHQVQESRCEKSQLSSAMVQNLSTQLF
LSPRHVNPHANAEGLKILACRGDRAERRAVLSHVHDLLHSGEAPEQIVVTARHMGQLADA
LRHDCQSAGLPAFFDQPHPLSSFAETRFLLDLLRMELLDWPTELLLGICDHELLSLSEGN
EAIPRLEVTAVVSQLLRRFNFTGGRHELIQQITRLVEAEGETGAPSEETAAAIARIRNLD
DLLSTLRTNANFSDWIDRLLRMITVLTANQSTDSKTDLSSLWCLLERFFGQVKNHSQSYV
QSDAEVSLSIFVRRLEELLADQTVPDSVSEAGRVRFLEMDQVRGLDVEHLIVMGAVESQL
PAGRSEDCVFSEQSREQLNELGLPLSHRARHQSEEMLLYYSVITRARKTLTLTYSQIDEK
GEPTFPSPFVRATKELFEPSAVTEEILGNLNPVPQNQTDVLTTADLRVHAVQKGFAGNGS
LLKSLAVDPVRQPTIRNLVAAAETNWHRFHERGLTRFDGRINSPAALRRIQKLFPPGHQF
SVSELEAYANNPFRFFLSHLLKLEELEPVGLATDRRRRGIALHNALAEFHRLIDTPSQHL
QDELLESFRVLIEKHLLKGRVTSSAEWRLREVETRHANSWAERYFQQWAAYQEVFQGLWK
QFPAIASCEVAFGNAPDEQESAGEDSQSNKLPALKVGKDDHAVLLRGRIDRVDTSDVEGR
TLFNVIDYKLSGASKFTADDVRTGTALQLAVYARAIRELQLAEQDANVSQYIYWDLNGTG
WTNGLNNGKRKPGLLEGEQAEEIDSALDEVIPDLVGSIRQGRFPLTEVSNRQSFGQQYSA
AAREVPWKAIADVLSKREYAIPALGAADS
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgtggaattgttgatcggagttgccggcaccgggaaaaccacccgtctgctc
gaccgatatgtcgatgtcctccagcaggactccgcagacggaagactcgcgaccagcctc
tggctgacccccacccgacggactcgcaagcagattcgcggcgaactactcaaacgcagc
gaacgtccgatccttcaacccaacgtactgaccttttctgacttcgcggacgccatcgtc
caacgagcgaatccactgatgaggcaactcgactcgatcggtcggctgcagatacttcga
gatgtcattgaggaattggccgtagcaggaaggcttccgcacttcgcccccattgtggaa
acccccggatttttgcgggtggtgtccggtgtcatctcagagttgaaacgggaagaaatc
tggccggaacatttcgaaactgatggtcccaaagccaaaagcatggcggggcaacgcggc
caatgggaactcgtgcgtatttacacggcttatcaacggcgactgaagcacccccacgat
caagatgatcagggtgaattgtacgacgcagaaggtcgattctggtctgcgagggatttt
ctgaatgcgggacaccgtgaaccttttgcaaatttgcaaaccgtattcgtcgacgggttc
tccgactttacgaaaacacaaattgagattctctcactgctcgcaaattttgtgggcgag
gtgaagattaccttaccgggagaagaatcgaacgagcatcccgaactgttcctgaaaagc
aagatgacgcggaccgccttgctgcgagcgtttggcagccaacatcaggtacaggagtcg
agatgtgagaagtcgcaattatcaagtgcgatggttcagaatctgtcgactcaactcttc
ctctcaccacgacacgtaaacccacacgccaatgccgagggcttgaagattttggcctgc
cgtggtgatcgagcggaacggcgagcggtgctgagccatgtgcacgacttgcttcattca
ggagaagcgccggagcagattgttgtcaccgcccgccacatgggacagttggcggacgcc
ctgcgtcatgactgccaatcggcaggactccctgcttttttcgatcagccccatcctctg
agttcatttgccgagacgcggtttctactcgacttactgaggatggaactactcgactgg
cccactgaattgctgcttggaatttgtgatcatgaattgctgtctcttagtgaaggaaac
gaggccataccccggctcgaagtcactgcggtcgtctcgcaactactacgcaggttcaat
ttcacgggcgggcggcacgagttaattcaacagattactcgattagtcgaagccgaaggc
gagaccggtgccccatcggaagaaacagccgcagctatcgcacggatacgcaatcttgac
gatttgctgagtacactccgcaccaatgcaaacttcagcgactggatcgatcgcctgctg
cgaatgattacggtactgactgctaatcagagtaccgattctaaaactgatctcagttct
ctttggtgtttattggaacggttcttcggtcaggtgaaaaaccattctcaatcgtacgtt
caatcagatgcggaagtatctctcagtatctttgtgcgacgattagaggaactgctggcg
gatcagactgttcctgattctgtgtcggaagcgggacgcgtgcggtttctggaaatggat
caagtacgtgggctcgatgttgagcatttgatcgtcatgggggcggttgagagtcaattg
ccggcagggcgttcggaagactgtgtcttctccgaacaatcgcgggaacagttgaatgaa
ctcgggttgccactctcgcaccgtgcccggcatcagtcggaagaaatgctgctgtactat
tcagtcataacccgtgcccgcaaaactctgacgttgacctattcgcaaatcgatgagaaa
ggtgaaccgacttttcccagtccattcgtgcgagccacgaaagagttgtttgagcccagt
gcagtcactgaagaaatcctcggcaatctcaacccggtcccacagaatcaaacggatgtc
ctgacgactgctgatctacgcgtacacgccgttcaaaaaggtttcgcagggaatggatct
cttttgaaaagcctggcggttgatcccgttcgtcagccaacaattcgcaatcttgtcgct
gctgctgaaacaaactggcatcggttccatgagcggggactcacacgattcgatggccgt
attaatagccctgctgcacttcgccgcattcaaaaactgttcccaccagggcaccaattc
agtgtttccgagttagaagcttacgccaacaatcctttccgtttcttcttgtcgcatcta
ttgaaactcgaagaactggaaccggtcggacttgccacagatcggcgtcgccgagggatc
gcgctgcacaacgcgttggcagagtttcaccgtttgatcgacacaccttcccaacatctc
caggacgaacttctggaatcgttccgcgtgttgattgagaagcacttgttgaaaggcagg
gtgacgtcgtcggctgagtggcgattgcgggaagtcgaaacccggcatgcaaacagttgg
gcagaacgctacttccaacaatgggcggcttatcaagaagtctttcaaggactgtggaag
caattcccggcaatcgcatcatgtgaagtggccttcggcaatgctcccgatgaacaggag
tccgcaggcgaagacagtcagagcaacaaactccccgcgttaaaagttggcaaagacgat
catgctgttctcttgcggggacgcatcgaccgcgtcgatacgagtgacgtcgagggaaga
acgttattcaatgtcattgactataaactttccggggcatcgaaattcacggctgatgat
gtgcgaacaggcacggcgctccagttggcggtttatgcccgtgccattcgtgaactgcaa
ctggccgaacaggacgccaacgtgagccagtacatttactgggatttgaacggcacaggt
tggacgaatggattgaacaacggaaagagaaagcccggtttgttggaaggggagcaagcc
gaggaaatcgattccgcattggatgaagtcattcccgacctggtcggctctatccgccag
ggacgctttccattaacagaggttagtaatcggcaaagtttcgggcagcagtattccgcc
gctgcaagagaagttccctggaaagcgattgcggacgtactctctaaacgtgagtacgca
ataccagcactgggagccgccgactcgtga
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