Calycomorphotria hydatis: V22_22950
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Entry
V22_22950 CDS
T09810
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
chya
Calycomorphotria hydatis
Pathway
chya03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
V22_22950 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chya03019
]
V22_22950 (rny)
Messenger RNA biogenesis [BR:
chya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V22_22950 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
BRE1
dUTPase
KH-I_KHDC4-BBP
Glyco_hydro_36
Motif
Other DBs
NCBI-ProteinID:
QDT65049
UniProt:
A0A517T9L7
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Position
complement(2715621..2717162)
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AA seq
513 aa
AA seq
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METYIPAIIALIAGAAGGFFFDRLRTGAAYKDRDRIIEEAEKEAQNLLKSQELEAKEQML
VRREEMEKELESMRDELRQQEKRLDKRETALEDAQEGFQKRERMIEQSQRKITERAKAME
SRERELERIISEEQGLLHKISGLDKDRATELLLDRLDKRLRNETGAVLLAHQQRVKEDCD
KQAREIIGMAVQRYAAAHTSETTVSTVDIPSDEMKGRIIGREGRNIRAFEKETGVDVVVD
DTPGVVVVSAFDSVRREIGKIALRKLIEDGRIHPTRIEEVVKETEQEMDKYIRELGIEAA
QEAGVPNLHDKIVDLMGRLQFRTSYSQNVRRHSIEVAHLTGMMAEQLGLDGDMARRCGFL
HDIGKAADHEMEGGHPHVGAELLKRYGEGEEVVHAARGHHDDIRPEFIYTVLVAAADAVS
AARPGARRETLEKYVRRLEELEALANGFPGVQQCYAVQAGREIRIIVDAQAVNDNESVKL
SKEIAEAIEQSLTYPGEIKVSVLREMRSIEYAR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgtatattcccgcgatcatcgctctgattgcgggtgcagccggcggattcttc
tttgatcgtctgcggactggagccgcctacaaagaccgtgatcgcatcattgaagaggcc
gaaaaagaagcacaaaacctgctgaaatctcaggaacttgaagcgaaggagcaaatgctc
gtccgccgggaggaaatggaaaaagaactcgaatcgatgcgtgatgagttgcgccagcag
gaaaaacggctcgacaaacgagaaaccgcactggaagacgcccaggaaggattccaaaaa
cgcgagcggatgatcgagcagtcacaacgcaaaatcaccgagcgggccaaggcgatggaa
agccgggaacgcgaactcgaacgcattatcagtgaagaacaagggctgctgcacaaaatc
agtggtctcgataaagaccgcgcgacggaacttctgctcgatcggctcgacaagcgactg
cgaaacgagacgggggccgtgctgttggcccatcaacaacgggtcaaagaagattgcgac
aaacaggcccgcgagatcattggcatggcggtgcagcgctacgcggcagcccatacttcg
gaaacaaccgtctcgaccgtcgatatccccagcgatgagatgaagggacggatcatcggt
cgtgaaggacgcaacatccgcgctttcgaaaaggaaaccggtgtcgatgtcgtggtcgat
gacactccgggagtggtcgtcgtttcggcctttgacagtgtgcgtcgtgagatcggtaaa
attgcgctacggaaactgattgaggatggccgaattcatccgacacggattgaagaagtc
gtcaaagagaccgagcaggaaatggacaaatacattcgcgaactgggcatcgaagccgcc
caggaagcgggggtacccaacctgcatgataagattgtcgacctgatgggccggctgcag
ttccgcacgagttacagccagaacgtccgacgacactcgatcgaggtcgctcacttaacc
ggcatgatggccgagcagcttggcttggatggcgatatggcccgtcgttgcggcttccta
catgacatcggcaaggcggcagaccacgaaatggaaggtgggcatccgcatgttggtgcg
gaactcttgaagcgttacggcgaaggtgaggaagtggtgcatgccgcccgtggccaccat
gatgacattcgccccgagttcatttacacggtgttggtcgctgccgcggatgcggtttcg
gctgctcgccctggtgctcgacgcgagacactggaaaagtatgtccgcaggttggaagaa
ctcgaagcattggccaacggcttccccggcgtgcagcagtgctatgcggtgcaggcgggg
cgcgagattcgcatcatcgtcgatgcccaggcggtcaacgacaacgagtcggtgaagttg
agcaaggagatcgccgaggcgatcgagcagagtttgacttaccccggcgaaatcaaagtg
agcgtgcttcgcgaaatgcgctcaatcgagtacgcccgctga
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