Calycomorphotria hydatis: V22_28060
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Entry
V22_28060 CDS
T09810
Symbol
spoVD_2
Name
(GenBank) Stage V sporulation protein D
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
chya
Calycomorphotria hydatis
Pathway
chya00550
Peptidoglycan biosynthesis
chya01100
Metabolic pathways
chya01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V22_28060 (spoVD_2)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
V22_28060 (spoVD_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
chya01011
]
V22_28060 (spoVD_2)
Enzymes [BR:
chya01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V22_28060 (spoVD_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
chya01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
V22_28060 (spoVD_2)
BRITE hierarchy
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QDT65551
UniProt:
A0A517TAZ9
LinkDB
All DBs
Position
complement(3347566..3349644)
Genome browser
AA seq
692 aa
AA seq
DB search
MLNRPHHELRETERGGQLALKFDEFPNRRLSWLAMVFCVGLTIIGVRLANVQHTLAAREE
TSLIPASTAIEPIPARNGRILTRDGQILAHDQQRFEVHMHYRWLEEPANEQWLRQSAYRW
RREQPNSSKITLEDAKAAVLEQREQLWDHLCEVAEINRATFDESRRELQTRVEKIYEVVL
ARRESKTVSDEEAEAPANWWQIITQALTTPPHRDRDDPLVILEETQFHPLIPAVPVSAAA
EIDAQTEQFPGVKVVAVSRREYPFHNLAAHVIGYRFDTSDDPTKGQVGLEGSYNIHLRGV
AGTRKRWFDRDGLPLRDEVRNEPRQGRDLVTSLHVGVQKYLERRLDQAFAAEGKEITGGA
AVVMDVRTGEVIALASAPRFDIQLAADRDDDFWNAIREDKSRPLFHRATQAALPPGSVFK
PVVGIAAVESGAINADEPFDCAGYLDRPHRFRDAIYQSAGVGHALITLPGALGQSCNVFF
FDAGRKTGAEALLEWTRKFGIGSRTGIDLNEEAAGRLPRFDREVDLFAEDRLLEFSVGQS
TLTATPLQITRMTAAIANGGRLLLPRLVTGYGVSHVQQSTAVVDDDSFFRIADVSEQTLS
IIREGMRQAVIGEGGTAAVLQDVPVPVAAKTGTAQVGGGKSPHAWITGFVPADHPQYAFT
VVLEHGGSGGRAAGPIARDMIRAIEHYGLLEK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatcgacctcatcacgaacttcgggaaacggaacgcggcggacaacttgcgctg
aagttcgatgagtttcccaaccgccggctttcctggctggcgatggtgttctgtgttggc
ctgacgatcatcggtgtgcgacttgcaaacgtgcagcacacattggcggcacgggaagaa
acgtctctgattcccgcgtcgaccgccatcgaaccgatccccgcccgcaacggtcgcatt
ctgacccgcgacggccagatcctcgcccacgatcaacaacggttcgaagttcacatgcat
taccgctggctggaagaaccggccaacgaacaatggctgcgacaatcggcctatcgctgg
cgcagggagcaaccgaactcctcgaagatcacattggaagacgcaaaagcagcagtgctt
gagcaacgcgaacaactgtgggatcacttgtgtgaagttgcggaaatcaatcgtgccact
ttcgatgaatcacgacgcgagctgcagacacgcgtcgaaaaaatttacgaagttgtgttg
gctcgccgtgaatcaaagaccgtatccgatgaagaagcggaggctcctgccaactggtgg
cagatcatcactcaagctctcacgacgccgcctcaccgtgatcgggatgatcctctggtg
attctcgaagagacgcagtttcatccgctcattcccgcagtcccggtttcggctgcggcg
gaaattgatgctcaaacggagcaattccccggcgtgaaagtggtggcggtttctcgacgc
gagtatcccttccacaatctggcggctcacgtgatcggttatcgatttgacacttccgac
gacccgaccaaaggccaggtggggttggaggggagttacaacattcacctgcgtggcgtg
gcgggcactcgcaaacgctggtttgaccgagatggattacctttgcgggacgaggtgcgg
aacgaaccgagacagggccgcgatttggtgacttcgctacatgtcggcgtgcagaagtat
ttggaacgaagattagatcaggcctttgctgctgagggtaaagaaatcaccggcggtgcg
gccgtggtgatggatgtacggaccggcgaagttattgctctcgcctctgctccgcgattc
gacattcagctggcagcggatcgggatgatgatttttggaacgccattcgagaggacaag
agccgtccgttattccatcgcgcgacgcaggcggctttgccccccggatcggtcttcaaa
ccggtagtgggcatcgccgcggtggagagtggtgcgattaatgccgacgaaccgttcgac
tgtgcgggctacctcgatcgaccgcatcgatttcgcgatgccatttatcagtccgctggt
gtcgggcatgccttaatcacgttgcctggagcgctggggcagtcgtgcaatgtgttcttc
ttcgacgccgggagaaaaactggtgctgaggcgcttcttgagtggactcgtaaattcggt
atcggtagccgcacgggaattgatttgaatgaagaagctgcgggaaggttgccgcgattt
gatcgggaagttgatctctttgcggaggatcggctgctggagttttcggtcgggcaatca
accctcacagccacgccgctgcaaatcacgcgtatgaccgccgcgattgccaatggtggt
cgcttgctgttgccgcgattggtgaccggttacggcgtgagtcacgtgcaacaatcgacg
gcggttgtggatgacgactcatttttccgcattgctgatgtgtcggagcagacattgagc
atcatccgcgaagggatgcggcaagctgtgatcggcgaaggaggcacggcggctgtcctt
caagatgttcccgtcccggtcgccgccaagacgggcaccgcccaggtgggtgggggcaag
tcgccgcatgcgtggatcaccggattcgttcccgccgatcatccccagtatgccttcact
gtcgtgctggaacacggtggaagcggtggccgcgctgccggaccgattgcccgcgatatg
atccgggccatagagcattacggtttgctggaaaagtag
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