Calycomorphotria hydatis: V22_41560
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Entry
V22_41560 CDS
T09810
Symbol
yhaM_2
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
chya
Calycomorphotria hydatis
Brite
KEGG Orthology (KO) [BR:
chya00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chya03019
]
V22_41560 (yhaM_2)
Messenger RNA biogenesis [BR:
chya03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V22_41560 (yhaM_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QDT66884
UniProt:
A0A517TET4
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All DBs
Position
complement(4936134..4937117)
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AA seq
327 aa
AA seq
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MSRKYLNEYQDGDSVDEVFLLAEKTLRANRNANLYLLAQLRDKTGTMSGLQWNVTEESAT
KYSAGDFVKVKGKVQLYQGGLQMIVTSVKAVPADDLDPEEFHPQPGADVAHLVERLREIL
LGLSNPHLARLMPQFLDDQELMESLGQAPAGIKAHHAFHGGLLEHVVNILEVATLIEPRY
PGLDHDVLKVGVFLHDLGKVRELEYDTTFAYSDEGQLLGHMEIGCEMLEEKIRQADADSE
EKFPQELRWHLKHLILSHHGTAEFGSPKVPMTAEAIALHHLDALDAKIFEFSQTIADDPN
AESNWTPFNPRLGRKLYKTNQTSQSES
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgaaaatatctcaacgaatatcaggacggcgacagcgtcgacgaagtgttcctt
ctggcggagaagacactgcgggcgaatcgcaacgcgaatctctacttgctggcacaattg
cgcgacaaaaccggcacgatgagcggcctgcagtggaacgtgacggaggaatcggccacg
aaatactccgccggcgatttcgtgaaggtcaaaggtaaggtgcagctttatcagggcggt
ctgcagatgatcgtcacctcggtgaaggctgtccctgcggatgaccttgatccggaagag
tttcacccgcagccgggggcggatgttgctcatcttgtagagcggttgcgggagatttta
ttgggcttgtccaatccgcacctcgcccggctgatgccgcagtttctggatgatcaggaa
ctgatggaatcactcggccaggctccggcaggtatcaaggcacaccatgcgtttcatggc
gggttgctggagcatgtggtgaatatcctggaggtcgcgaccttgattgaaccgcgatat
ccggggctcgaccatgatgtgctcaaggtcggcgtatttctgcacgacctcggcaaagtg
cgggagctggagtacgacacaacctttgcgtattccgacgaaggtcagctgttggggcac
atggagatcggctgtgaaatgcttgaagagaaaatccggcaggccgatgctgactccgag
gagaaatttccgcaggagcttcgctggcatttgaagcatttgattttgagccaccacggt
acagcggaattcggcagccccaaagttccgatgacggccgaagcaatcgctttgcatcac
ttggatgcgctcgatgcgaaaatcttcgagttttcgcagacgatcgcggatgaccccaac
gccgagtcgaattggacgcccttcaatccccggctgggacggaagttgtacaagacgaac
cagactagtcagtccgagtcctga
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