Croceimicrobium hydrocarbonivorans: H4K34_01050
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Entry
H4K34_01050 CDS
T07152
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chyd03400
]
H4K34_01050
Enzymes [BR:
chyd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H4K34_01050
DNA repair and recombination proteins [BR:
chyd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H4K34_01050
Prokaryotic type
H4K34_01050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Terpene_synth_C
Motif
Other DBs
NCBI-ProteinID:
QNR24459
UniProt:
A0A7H0VFG1
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All DBs
Position
complement(222109..223413)
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AA seq
434 aa
AA seq
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MAQKELAIFWMRRDLRLEDNHGLAKALEGDYPVLVLFIFDRAILDQLPPRDARVQFIWQE
LKQIKEQLQAKGSDLLVKYGEVTEIWKEILKSYSIKAVYANRDYEPPARERDKKIYETLK
AQEIPFKGFKDQVLFEKGEVLKDNGEPYVVYTPYMRKYKHLLKDSHLEPYASADSNHYAQ
LKGLDFPDLESMGFEAFDFEYPNRDWRKSLIENYHETRDIPSIRGTSRLSIHLRFGTISI
RALAKEAKQWNDKYFNELIWRDFYQQVLYHFPHSFKDSFRKEYDQIKWEHNEAHFKAWCE
GKTGYPLVDAGMRELNATGFMHNRVRMVVASFLSKHLLLDWRLGETYFAEKLLDYDAASN
VGGWQWAAGCGVDAVPYFRVFNPALQLKKFDPELKYVKKWVEEYGTDAYPQPIVDHKNAR
ERALDRYKSALKSD
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaaaagaactagcaattttttggatgcgcagagatttgcgcctggaggataat
catggactggcaaaggccctggaaggggattatccggtgctggtgctctttatttttgat
cgggccattttggatcaattacctccccgcgatgcccgggtgcaatttatttggcaagag
ttaaagcagatcaaagaacaattgcaggccaaaggctcagatctcctagtgaagtatggt
gaggtaacagaaatttggaaggaaattttgaaatcctattccattaaggctgtgtatgca
aatcgcgattatgagccaccagcaagggaaagggataaaaagatttatgaaaccttaaag
gcgcaagagatacctttcaaaggttttaaagatcaggttttgtttgaaaaaggggaggtg
cttaaggataatggcgagccctatgtggtatacactccctatatgcgaaagtataagcac
ttacttaaggactcacatttggagccctatgcatccgctgattccaatcattatgcgcag
ctcaaaggcttggattttcccgatttggaatccatgggttttgaagcttttgattttgaa
tatcccaatcgtgattggcgtaaatccttgattgaaaattaccatgaaacccgcgatatc
ccatccataaggggaactagtcgactaagtattcatttacgttttggaactatctccatc
cgagctttagctaaagaggcgaagcaatggaacgacaagtattttaatgaattgatctgg
cgcgacttttaccagcaggtattatatcatttcccccattcttttaaagatagctttcgt
aaggaatacgatcaaattaaatgggagcacaatgaggctcattttaaggcctggtgtgag
gggaagaccggttatcccttagtggatgccggaatgcgtgagttaaacgcaactggcttt
atgcataatcgggtacgcatggtggtggctagttttttaagcaaacaccttttactggat
tggcgattgggggaaacttacttcgcggaaaagcttttggattatgatgcggccagcaat
gttggaggttggcaatgggctgctggttgtggggtagatgccgttccttatttccgagta
tttaatcctgccttgcaactgaagaagtttgatccggaattgaaatacgttaaaaaatgg
gttgaggaatatggtactgatgcctatcctcaacccattgtagatcataaaaatgctcgg
gagcgagctttggatcgttataagtccgctttaaagtcggattaa
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