Croceimicrobium hydrocarbonivorans: H4K34_01925
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Entry
H4K34_01925 CDS
T07152
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Pathway
chyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4K34_01925 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chyd03019
]
H4K34_01925 (recQ)
03400 DNA repair and recombination proteins [BR:
chyd03400
]
H4K34_01925 (recQ)
Enzymes [BR:
chyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4K34_01925 (recQ)
Messenger RNA biogenesis [BR:
chyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
H4K34_01925 (recQ)
DNA repair and recombination proteins [BR:
chyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H4K34_01925 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HHH
UBN_AB
Motif
Other DBs
NCBI-ProteinID:
QNR24625
UniProt:
A0A7H0VFX7
LinkDB
All DBs
Position
412658..414856
Genome browser
AA seq
732 aa
AA seq
DB search
MGTQISTAQAHLKRFFGFSQFKGNQEAVIENVLAGNDTFVIMPTGGGKSLCYQLPAIMQD
GTAIVVSPLIALMKNQVDSLRGFADDSGIAHVLNSSLSKRDVEQVKADIVNGITKLLYVA
PESLTKEENIEFLRSVEISFFAIDEAHCISEWGHDFRPEYRNLKQIIQKIGRKPIIGLTA
TATPKVQSDIQKNLGMEDAEVFKASFNRPNLFYEVRPKTKNVDRDIIRFIKKNEGKSGII
YCLSRKKVEELAQTLQVNGINSLPYHAGLDAGTRSRHQDAFLMEDADVIVATIAFGMGID
KPDVRFVIHYDMPKSLESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFLNGKPVSEQE
IGMQLLQEVIAYAETAMNRRKFILHYFGEFFDEENGPGAKNDDNSQNPRKQFDAREDLKT
VLETIIATAQRFKAKSVVDTLCGTLNSITKQYKVQELPVFNMGADKDEKHWMSVIRQAIV
QGYLRKDIEKYGVLFISDKGQAFLKEQGPFLIAEDHDYEEEAGQEEIISEQKAGASFDPE
LFKMLKELTRKVAKSKGLPPFTVFQEPSLNEMALHYPTSLDELKQISGVGEGKARKFGTP
FLELISKYVEDNNIEKGDGLLVKSVVNKSGLKVYIIQSTDRKLPLEDIAAAKGLSMDDLV
TEIEHIVHSGTKVNLDYVLEDMFDEEQLEEVHDYFMEADSDELQEAYDEFDGDYSEEELR
LMRIKFMSEVAN
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
ttgggaacgcaaatttccacggctcaagcgcatttaaaacgcttttttggttttagccaa
tttaagggcaatcaagaggccgtaatcgaaaacgtacttgctggcaacgacacctttgtg
atcatgcctacaggcggaggtaaatcactctgctaccaattaccggccattatgcaggac
ggtaccgccatagtcgtatcgccattaattgccctgatgaaaaatcaggtggatagttta
agaggctttgccgatgattcgggcattgcacatgtgcttaactcttcccttagtaagaga
gatgtagaacaggtaaaggctgatatcgtaaatggtattaccaaattgctctacgttgct
ccagaatccctcaccaaagaagagaatatcgaattccttcgctcggtagagatttctttc
ttcgcgattgatgaagctcactgtatttcggaatggggtcatgacttcagaccggagtac
cgcaatcttaaacagatcatccaaaaaatcgggcgtaagccaattattggcctcaccgct
acggcgacccccaaggtgcaaagcgatattcagaaaaacctgggcatggaagatgccgag
gtcttcaaagcttcctttaaccgcccgaacctcttttatgaggtacgtcccaaaaccaag
aatgttgatcgtgatatcattcgcttcatcaagaagaatgaaggtaagagtggcatcatc
tattgcttgagtcggaaaaaagtggaggagctggcccaaaccctgcaggtaaacggaatt
aactccctgccctatcatgctggtttagatgcaggcacccgctctcgccatcaggatgca
ttccttatggaagatgccgacgtgattgtggccactatcgccttcggaatgggaatcgat
aagccggatgtgcgctttgtgattcactacgatatgcccaaaagcctggagagctattat
caggaaaccggtcgtgccggtcgtgatggtggcgaaggccattgcctggctttttactcc
tataaggatgtagaaaagctggagaaattcctcaatggtaagcctgtctcagagcaggaa
ataggcatgcagcttctgcaagaggtgattgcctatgcggaaaccgccatgaatcgaagg
aaattcattctccattatttcggggaattctttgatgaagaaaatggacccggagcgaag
aacgatgataacagtcaaaatccgcgcaagcaatttgatgctcgtgaggatttaaaaacg
gtattggaaaccattatagctaccgctcaacgcttcaaagcgaaatccgtggtagatact
ctatgtggaactttgaactccattaccaagcagtataaagttcaggagctccccgttttc
aatatgggagcagataaagacgagaagcactggatgtcagtaatccgccaggccattgtt
caaggatatctgcgtaaggatatcgaaaaatatggagtactcttcattagcgataaaggt
caggccttccttaaggaacaaggtcccttcctaattgcggaggatcacgactatgaagaa
gaagccggacaagaagagataatctctgaacaaaaggctggcgcttccttcgatccggag
ctcttcaaaatgctgaaggaactcacccgtaaggtggccaaatccaaaggcctgcctccc
ttcaccgtattccaagaaccttctttaaatgagatggccctgcactaccctaccagtctc
gatgaactgaaacagatctctggcgttggagaaggtaaggcccgcaagtttggaactcct
ttccttgagctcatcagcaaatacgttgaagacaataatatcgagaaaggcgatggcctg
ctggttaaatcagtagtgaataaatctggcttaaaggtctacatcattcagagtaccgac
cgtaagcttcccctcgaagatattgccgctgccaaaggcctgagtatggatgatctggta
actgaaattgagcacattgtgcattcaggtaccaaagttaatctcgactatgttttggaa
gatatgttcgatgaagaacaattggaagaagtgcatgattatttcatggaagccgactca
gatgaactgcaagaggcttacgatgaatttgatggcgactacagtgaggaagaattgcga
ttaatgcgcatcaaattcatgagcgaagtagcgaactaa
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