Croceimicrobium hydrocarbonivorans: H4K34_03240
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Entry
H4K34_03240 CDS
T07152
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Pathway
chyd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H4K34_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chyd03019
]
H4K34_03240
03016 Transfer RNA biogenesis [BR:
chyd03016
]
H4K34_03240
Enzymes [BR:
chyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H4K34_03240
Messenger RNA biogenesis [BR:
chyd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H4K34_03240
Transfer RNA biogenesis [BR:
chyd03016
]
Prokaryotic type
tRNA degradation factors
H4K34_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH_2
Motif
Other DBs
NCBI-ProteinID:
QNR24870
UniProt:
A0A7H0VGM2
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All DBs
Position
710933..713077
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AA seq
714 aa
AA seq
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MIPNAITQEIKLADGRTITIETGKLAKQADGSVVVRMGDTMLLATVVSNKEAMDGIDFLP
LTVDYREKFSSAGRMPGGFIKREARPSDEEILVMRLVDRVLRPLFPKDYHADVQVMISLN
SWDPNVKPDALAGLAASAAIAVSDIPFNGPMSEVRVGRVNGEFIINPTPAQLEESDIDMM
VGATADSVVMVEGEMKEISEKEMLDAIAAAHEAIKVQVQAQLDLAAQVAKSSPKREYSHE
THDEALRDQIMKDLYDKVYAVAKSGLSKEERSAQFKTVRDEYMEANFSAEELEEKSGLIK
TYYHDVEYHAMRNMILKDRQRLDGRQLNEIRPIWSEVDYLPSTHGSAVFTRGETQSLTTV
TLGSKLDENRIDNVTFSGSERFYLHYNFPPFSTGEARPIRGTSRREIGHGNLAQRALKGM
VPDDNFYTIRVVSDILESNGSSSMATVCAGTMAMMDAGIKMKAPVSGIAMGLITDESGEY
AVLSDILGDEDHLGDMDFKVTGTKAGITACQMDIKIKGLSYEILEKALNQAKDGRLHILG
EMMKTIDAPRTELKPHAPKLTMMKIPKEFIGMIIGPGGKNIQKLQLDTETTITIEEDGEY
GVIEISGTDAAKMAKAEARIKEIAFVPEVGEVYNGLVRSIQPYGAFVELAPGTDGLLHIS
EIAHRRLQTVEEELKEGDRIDVKLIGKDDRGKLKLSRKALLEKPAAQEAKKEEN
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaacgctattacgcaggaaatcaaattagcagacgggagaaccatcaccatc
gaaaccggaaaactggcgaaacaagccgacggttctgtagtggttcgcatgggtgacacc
atgttgttagcgactgtagtttcaaataaagaagctatggatggcattgattttttgccc
ctaaccgtagattaccgcgagaaattttcttctgccggccgcatgcccggtggattcatt
aaaagagaggctcgtccttccgacgaagaaatattagtgatgcgattggtggaccgtgtt
ttacgtccgcttttcccaaaagattaccacgctgatgttcaggtgatgatctcccttaac
tcttgggatcctaatgtaaagcctgatgctttagccggtttagctgcctctgctgctatt
gccgtttctgatattccttttaacggcccgatgtctgaagtacgcgtaggtcgtgtaaat
ggtgaatttattatcaaccctactcctgctcaattagaagaatccgacatcgatatgatg
gtgggtgctactgcagatagtgtagtaatggttgaaggtgagatgaaagagatttctgaa
aaagaaatgcttgatgccatcgccgccgctcacgaagcaattaaagttcaagtacaagct
cagttggatttagcagcccaagttgccaagtctagccctaagcgcgagtacagtcatgaa
actcacgatgaagctcttcgtgatcaaatcatgaaagacttatacgataaggtatatgcc
gttgctaaaagtggtttaagcaaagaagagcgttctgctcagtttaaaaccgttcgcgac
gagtatatggaagctaatttcagcgctgaagagctggaagaaaaaagcggccttatcaaa
acttattatcacgatgttgaataccacgccatgcgtaacatgatcttgaaagatcgtcag
cgtttggatggtcgtcaattgaatgagattcgtcctatctggtcagaggtagattacctt
ccttctacgcacggttctgccgtatttacccgtggggaaactcaatctcttactaccgta
accttaggaagcaagctggatgagaaccgcatcgataacgtaaccttcagtggttctgag
cgtttctacctgcactacaacttccctcctttctctaccggtgaagctcgccctattcgc
ggaaccagccgtcgtgagatcggtcacggtaaccttgcccagcgtgccttaaaaggcatg
gtgcccgacgataacttctacaccattcgtgtggtttctgatattttggagtctaacgga
tcatcttccatggcaacggtttgtgccggtactatggcgatgatggatgccggtatcaaa
atgaaagctcccgtatcaggtatcgcaatgggattaatcaccgacgaaagtggagagtat
gccgtattgagcgacatccttggtgatgaagaccacttaggtgatatggactttaaagta
accggaaccaaagcgggtatcactgcttgtcagatggatatcaaaattaagggtctttct
tacgagattcttgagaaagctttgaaccaggctaaagacggtcgtttacacatcttaggt
gagatgatgaagaccatcgatgcccctcgtaccgaattaaagccacatgctccgaaatta
accatgatgaagattccaaaggaattcatcggtatgattatcggacctggaggaaagaat
atccaaaagctgcagcttgataccgaaactaccatcaccatcgaagaagacggtgaatac
ggagttatcgagatcagcggaactgatgccgcgaaaatggctaaagccgaagctcgcatc
aaggaaattgctttcgtaccagaagtaggtgaagtatataatggtttggttcgttcgatc
caaccttatggagcattcgtagaactcgctcctggaaccgatggtttattgcacatctct
gagattgcacaccgtcgtttgcaaaccgttgaggaagaattaaaagaaggcgaccgtatc
gacgttaaattgatcggtaaggacgaccgcggtaagctgaagctttcccgtaaagctctt
ttagagaaacctgcagcgcaagaagctaaaaaagaagaaaactaa
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