Croceimicrobium hydrocarbonivorans: H4K34_08780
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Entry
H4K34_08780 CDS
T07152
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
chyd
Croceimicrobium hydrocarbonivorans
Pathway
chyd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4K34_08780 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chyd03400
]
H4K34_08780 (uvrC)
DNA repair and recombination proteins [BR:
chyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4K34_08780 (uvrC)
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Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH_2
DUF7508
UVR
Motif
Other DBs
NCBI-ProteinID:
QNR25923
UniProt:
A0A7H0VJM5
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Position
complement(1940283..1942091)
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AA seq
602 aa
AA seq
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MPEEKISNILKTLPNKPGIYQHLDKNGKILYIGKAKDLRKRVSSYFTKGHDSARIRVMVS
KIADIQTIITETEFDALILENNLIKEYQPRYNINLKDDKTYPWICIKKEPFPRIFPTRNP
VKDGSEYFGPYASVKVMKTVLGLIRQLYPLRTCKLNLSPEAIESGKYRVCLEYHIGNCKG
PCEGLQSEEDYLKDVQSARELIKGHLTKVKQMLQEQMQIAATNLQFEEAQRLKEKFEIVD
RYQAKSTVVNPGITNVDVFTVFSDAEFAYVNLLKIVDGAVLQSHTLELKKKLEESNSRIL
EMAIPELRQRFKSTAREIFVSHEVDLEIPEVKIHIPQRGDKRSLIELSLKNGRYFRLEKL
KNIQIVDPDRHVKRLMKQMQQDLRMKVEPRHIECFDNSNIQGTNPVSACVVFKDGKPSKK
DYRHFNIKTVEGPDDFASMYEAVFRRYRRLLDEDEPLPQLIVIDGGKGQLGSALNALEDL
DLRGKIAILGIAKRLEELYFPGDKYPLYLDKRSETLKVIQRLRDEAHRFGITHHRNRRSK
GTFKSELSEIKGIGDESVKLLLRKFKSVKNIREASRENLKEVIGSKRAGIIYNHYHSDTE
GK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaggaaaaaatctccaatatcttaaagactttgcccaataaaccgggcatctat
cagcatttagataagaatggaaaaatcctctatatcggcaaagctaaggatcttcggaaa
agagtttcttcttacttcacaaaaggtcatgacagcgcccgcattcgcgtgatggtgagc
aagattgccgatatccaaactatcattaccgagaccgaattcgatgctctgattttagag
aataacctgattaaagagtatcaaccacgctataatatcaacctgaaggatgacaaaacc
tatccctggatttgcatcaaaaaggaacccttcccacgcatattcccaactcggaacccg
gtaaaagatggcagtgaatattttggaccctatgcctcggtaaaggtgatgaaaacagta
ctggggctgatccgccaactataccccttgcgtacttgcaagcttaatttatcgcccgaa
gctatcgaatccgggaaataccgggtctgtttggaatatcatattggcaattgtaaaggc
ccttgtgaaggactacaatcggaggaagactacctcaaggatgtgcaatccgcccgcgag
cttattaaaggccatcttactaaggtgaagcaaatgctgcaggagcaaatgcaaattgcc
gccacgaatcttcaatttgaggaagcccagagactgaaggaaaaatttgagatcgtagat
cgctatcaagccaaaagtaccgtggtgaacccgggaattaccaatgtggatgtttttacc
gttttcagcgatgcggaattcgcatatgtaaacctgctcaaaatagtagatggcgccgtg
ctgcaatctcacaccttggaactcaagaaaaagctggaagaaagcaattcccgaattttg
gaaatggctatccccgaattgcgtcagcgctttaagtcgaccgcccgcgagatctttgtt
tcccacgaagtagatctggaaatcccagaagtgaaaatccatatcccccagaggggagac
aagcgaagcttaattgagctttcgctgaagaatggccgttatttccgactcgaaaaactc
aagaacattcaaattgtagaccccgatcggcatgtgaaacgcctcatgaagcaaatgcaa
caagatttgcgcatgaaggtagagccgcggcatatcgaatgtttcgacaactccaatatt
caggggaccaatcccgtttcagcctgtgtggtttttaaagatggaaagcccagtaaaaaa
gactaccgtcattttaatatcaaaacggtggaaggccctgatgactttgccagtatgtac
gaagcggtatttagacggtaccgccgtttattagatgaagatgagcccttaccccaatta
attgtaattgatgggggcaaaggacaattaggatccgctttaaatgccttggaggacctt
gatctccgaggaaaaattgccatcttgggaatcgctaaacgattggaagagttatacttt
ccgggcgacaaataccccttatatttagataagcgctcagaaactttgaaagtaatccaa
cgtttgcgcgatgaggcgcatcgttttggtatcacccatcatcgtaaccggcgatccaag
ggcacctttaagagtgaactaagcgagattaagggcattggcgatgaaagtgtaaaactg
cttctgaggaagtttaaaagcgtaaagaatatccgcgaagccagccgcgaaaacctgaaa
gaggtaattggcagtaagcgtgcgggaattatatataatcactaccactccgataccgag
ggaaaatga
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