Croceimicrobium hydrocarbonivorans: H4K34_13375
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Entry
H4K34_13375 CDS
T07152
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Pathway
chyd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H4K34_13375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chyd03021
]
H4K34_13375
03400 DNA repair and recombination proteins [BR:
chyd03400
]
H4K34_13375
Enzymes [BR:
chyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H4K34_13375
Transcription machinery [BR:
chyd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H4K34_13375
DNA repair and recombination proteins [BR:
chyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H4K34_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
QNR23362
UniProt:
A0A7H0VCB4
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All DBs
Position
2932054..2933046
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AA seq
330 aa
AA seq
DB search
MAILNFQKPDQVIMNQATDTEGQFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSTIKGVVEDVTEIVLNLKQVRFKRQIEENETENINVSISGQERITAGDIGKFAS
SFQVLNPDLVICNLDPSVTITMDITVEKGRGYVPAEENKKSGAPIGTIAVDAIYTPIKNV
KYSIENYRVEQKTDFEKLILDITTDGSIHPKKALTEAAKILIQHFMLVSDEKISLEDNSS
SEADKYDEEILHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVTYTKSDLMKFRNFG
KKSLTELDELVESKGLNFGMDISKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgattttaaatttccagaagcctgatcaggttattatgaatcaagcgaccgacact
gaaggtcaatttgagttcaggcctttggagcccggttacggtctcaccgtaggaaacgcg
ctgcgtcgggttcttttgtcatcactggagggcttcgccatcacttctgttcgcatcgaa
ggagtggaccacgagttctccaccattaaaggtgtggtagaagacgttactgaaatcgtt
cttaaccttaaacaagtacgctttaagcgtcagattgaggagaacgaaactgagaatatc
aatgtgagcattagcggccaagaacgtatcaccgccggtgatatcggtaaatttgccagc
tctttccaggtactgaatccagacttggtaatttgtaatctcgatccttcagtgaccatt
accatggacatcaccgttgagaaaggtcgtggttacgtgcctgctgaggaaaacaagaaa
agtggtgctcccatcggaaccatcgctgtagatgctatctatactcccatcaagaatgtg
aagtacagcatcgaaaactatcgtgtggaacaaaagaccgacttcgaaaagttgatctta
gacatcaccactgatggttctattcatcctaagaaagcacttactgaagccgctaaaatc
ttgatccaacactttatgttggtgagcgatgaaaagatctctttagaagacaattcctct
tctgaggctgataagtacgatgaagaaatccttcacatgcgccaattgcttaaaaccaaa
ttggtagatatggatctttcagttcgtgcgttgaactgcttgaaagcagctgaagttgat
accttgggagatttggtaacttacaccaagagcgatctgatgaaattccgcaacttcggt
aagaaatctcttacagaacttgacgaattagtggaaagcaagggattaaacttcggtatg
gatatctctaaatacaaattagacaaggactag
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