Croceimicrobium hydrocarbonivorans: H4K34_14045
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Entry
H4K34_14045 CDS
T07152
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Pathway
chyd03030
DNA replication
chyd03430
Mismatch repair
chyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H4K34_14045 (holA)
03430 Mismatch repair
H4K34_14045 (holA)
03440 Homologous recombination
H4K34_14045 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chyd03032
]
H4K34_14045 (holA)
03400 DNA repair and recombination proteins [BR:
chyd03400
]
H4K34_14045 (holA)
Enzymes [BR:
chyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H4K34_14045 (holA)
DNA replication proteins [BR:
chyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H4K34_14045 (holA)
DNA repair and recombination proteins [BR:
chyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H4K34_14045 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QNR23490
UniProt:
A0A7H0VCP2
LinkDB
All DBs
Position
3112863..3113870
Genome browser
AA seq
335 aa
AA seq
DB search
MDYSALVAEIKKKQFRPIYFLMGEEPFFIDQISKLIEETALSEEERSFNQTVLYGSDVNT
SQVISEAKRFPMMAERVVIIVKEAQHIRDLDKLESYAMQPQPSTVLVFAYKHKKLDKRKK
IAKILDKEHVLFESKRIYDNQVPAWVEKLLKSKGFDASPKAVQMIAESLGTDIGRIYSEI
NKLALIVPKGSTIDENTVETNIGISKDFNNFELCNAINSGNFAKAIRIQKYFEANPKDNP
LVVTTGILFRNFRILMLMAQAKASGLPENNLAKEAGVSPWQAKDYLPALRFFDVRRIARI
MGYLRETDMKSKGVNNQGASDGDLLKELLFKIIYQ
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggactatagtgctctggtagcagaaattaaaaaaaagcagttccgcccgatctatttt
ttgatgggggaggaaccctttttcattgatcaaattagcaagcttattgaagaaacggct
ctgtcggaagaggagcgcagtttcaatcaaactgtattgtatggatcggatgtaaatacc
tcgcaggtgatctccgaagcaaaacgtttcccaatgatggcggaacgggttgtaatcatt
gtgaaagaagcacagcatatccgtgatttggataagctcgaaagctatgccatgcagcct
caacccagtacggttttggtttttgcctacaagcataagaagcttgataagcgtaaaaag
attgccaagatattggataaggagcatgttctttttgaatccaaacgcatttacgataat
caggtacccgcttgggtggagaaactcttgaaatccaagggttttgatgccagcccaaaa
gcggtgcaaatgattgcggaaagcttgggtaccgatattggccggatttatagcgagatc
aacaaattggcattgattgttcccaagggatctaccatcgatgaaaatacggttgaaacc
aatattgggataagtaaggacttcaacaattttgagctttgcaatgccattaacagcggg
aacttcgccaaggccattcgcattcagaagtacttcgaagccaaccccaaggataatccg
ctcgttgtcaccacaggtattctttttcggaatttccgcattttaatgttaatggcacaa
gcaaaggcttctggcctgcccgagaataacttagctaaagaagctggtgtatctccttgg
caagcaaaagactatctccccgctttacgcttttttgatgtgcgtcgaattgcccgaatt
atgggatatttgcgcgaaactgatatgaaatctaaaggagtgaataatcagggagccagc
gatggtgacctgctcaaagaacttctgtttaagattatttaccaatag
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