KEGG   Croceimicrobium hydrocarbonivorans: H4K34_14100
Entry
H4K34_14100       CDS       T07152                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
chyd  Croceimicrobium hydrocarbonivorans
Pathway
chyd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:chyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H4K34_14100 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:chyd03019]
    H4K34_14100 (rny)
Messenger RNA biogenesis [BR:chyd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H4K34_14100 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B KH_2 AvrPto KH-I_KHDC4-BBP DUF6481 DUF4954 Ribosomal_S18 Membralin
Other DBs
NCBI-ProteinID: QNR23501
UniProt: A0A7H0VCQ3
LinkDB
Position
complement(3123399..3124937)
AA seq 512 aa
METTTLILILAALIVGFGTAFVFNMLILKKKNQNILAEAQKEAEGIKKEKILQAKEKFLE
LKAEHEKVINKREQKLNDRFNNLKEKEQRVREHAENNKKDYKENQRLREELSKKVEVNDA
RSKELEKMHRKQVEQLEVISGLSPEEAKNQLLEALKEEAKTDAAAFIQTTMEEAQLSATR
EARKVVIQTIQRVATEQAVENSVSVFNIENDDVKGRIIGREGRNIRALEAATGVEIIVDD
TPEAIILSCFDPVRREIARLSLHKLVSDGRIHPARIEEVCNKTRKQIEEEIFEVGKRTTI
DLGIHGLHPELVRMVGRMKYRSSYGQNLLQHSREVANLCGIMAAELGLNPKIAKRAGLLH
DIGKVPSEESELPHAILGMKMAEKYGEKPEVCNAIGAHHDEIEMTGLISPIVQVCDGISG
ARPGARRQIAESYMQRLKDLEQLAISQNGVTQAYAVQAGRELRVIVDCEKVSDADAAKIS
FDISQKIQNEMTYPGQVKITVIRETRAVNVAR
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggaaacaacaactttaattcttattctggcagctttaatcgtaggctttggaaccgcc
ttcgtttttaatatgctgatcttaaaaaagaaaaatcaaaatatcctggccgaagctcaa
aaagaagctgaaggcattaaaaaggagaaaatcttacaggccaaggagaaattcctggag
ctgaaagccgaacatgaaaaggtaattaacaagcgtgagcaaaagctcaacgaccgcttt
aataacctgaaggaaaaagaacaaagggtgcgcgagcatgccgaaaacaacaagaaagat
tataaggaaaaccaacgcctgcgcgaggaactgagcaaaaaggtagaggtgaatgatgct
cgcagtaaggagctcgaaaaaatgcaccgcaagcaggtggagcaattggaagtaatctcc
ggcttaagtccagaggaagctaaaaaccaattattagaagctcttaaagaagaggctaaa
accgatgccgccgccttcatccaaacaaccatggaagaagcgcaattaagtgccactcgt
gaagcccgtaaagtggtgatccaaaccatccagagagtagctactgagcaggctgtggaa
aactccgtttcggtatttaatattgaaaacgacgatgttaaaggccgtatcatcggtcgt
gaaggtcgtaacattcgcgccctggaagcagcaaccggtgttgaaattattgtggatgat
accccggaagcaattatcctaagctgctttgatccagtacgtcgtgagattgcccgcctt
tctttacacaaattggtttcagacggacgtattcacccagcccgtattgaagaagtttgt
aataagactcgtaaacaaattgaagaggaaatcttcgaagtgggtaagcgtactacgatc
gatttaggtattcacggcttgcatcctgagttggttcgcatggttggtcgtatgaaatac
cgttcttcttacggacaaaacttgctgcaacactcacgtgaagtggccaacctctgtggt
attatggcggctgaattaggtttgaatcctaagatcgccaagcgtgccggcttattgcat
gatattggtaaagtaccttcggaagaaagtgaattgccacacgctattttgggtatgaag
atggccgagaaatacggcgaaaaacctgaagtatgtaatgcgattggtgctcaccacgat
gaaattgagatgactggccttatctctcctatcgttcaggtttgcgatggtatttctgga
gcccgtcccggtgcacgtcgtcagatcgccgaaagctatatgcagcgtttgaaagacctg
gagcaattagcaatttctcaaaatggggttactcaagcttatgcggtgcaagccggtcgt
gagcttcgggtaattgtagattgcgagaaagtgagtgatgccgatgctgcgaaaatcagc
ttcgatatcagccagaaaattcaaaatgaaatgacctatcccggacaggtaaagattacc
gtaatccgagaaactcgtgccgtaaacgtagcgcgctaa

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