Croceimicrobium hydrocarbonivorans: H4K34_17575
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Entry
H4K34_17575 CDS
T07152
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chyd
Croceimicrobium hydrocarbonivorans
Pathway
chyd03420
Nucleotide excision repair
chyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H4K34_17575
03430 Mismatch repair
H4K34_17575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chyd03400
]
H4K34_17575
Enzymes [BR:
chyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H4K34_17575
DNA repair and recombination proteins [BR:
chyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H4K34_17575
MMR (mismatch excision repair)
Other MMR factors
H4K34_17575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
AAA_30
AAA_11
UvrD_C_2
GvpD_P-loop
ResIII
AAA_16
DEAD
AAA_7
Microtub_bd
SLFN-g3_helicase
ATPase
TsaE
Terminase_6N
AAA_22
TrwB_AAD_bind
T2SSE
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QNR24158
UniProt:
A0A7H0VEL0
LinkDB
All DBs
Position
complement(3914444..3916351)
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AA seq
635 aa
AA seq
DB search
MTEIEEIFDHIHNGRNFLLSGGAGSGKTYTLVEVIKRVIEENPSAMIACMTYTNAAVKEI
EERVGHEHLYVTTIHDFLWDQIKHFQKELKLCLVELANEEEIKVIKLDGVDPVPNDYFDN
LEDGIQYKEYSRISQGVISHDEVIALSDRVFERYPKLGDMVKDKFKFIFVDEYQDTQIDV
VRIFLEHFKLTEKRNIIGFFGDAMQSIYDKRIGRLDDYRGTEEGQVREVQKRQNRRNPKL
IYELANKLRTDGLVQIHSTDNSAPNMTEGKVKEGEITFLYSASGDIDNVKAHLAWDFTNS
KETKELNLTHNLIANKASFQTLMDIYDKDKILEYKKRIKDHIKNHPVEWDPSKMTFGEVV
ERLKEGKTGKGLKMVEPAPKQQDFIKKNKNLYKVAMDMNFEVFSKVYVDKDQLLDDKKQD
ENDLNKKGSKRDNLIRHLYRLQEIIWLYQNERYYEFLKATDYKGKLGRVSEKRNLKNKID
SLVNVGEKTIEEVIQEANDYGICLIDDKLKRFAENQKYVYDQVIKVPFKELQALYEYLEG
RTPFSTQHKTKGTEFDNVLVILDNGGWNNYNFEYLFTNRTDKASVLERSRKIFYVCCTRA
KERLAVYYCDPSQAVIDKAIDWFGRENVVNLGETH
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatagaggaaattttcgatcatattcacaacggtaggaacttccttttgagt
ggtggagctggaagcggaaagacctacaccttggtggaagtcataaaaagagtcattgaa
gaaaacccaagtgccatgatcgcttgcatgacctataccaatgccgctgtaaaagaaatc
gaggaaagggtgggacatgagcatttatacgttaccaccatccacgattttctttgggac
cagatcaaacactttcaaaaagagctcaagctttgtttggttgaattggccaatgaagaa
gaaataaaagtcataaaattggatggtgttgatccagtaccaaatgactatttcgacaac
ttagaagatggcattcaatacaaagaatactctaggattagtcaaggcgtaatttctcat
gatgaagtcattgcattaagcgatcgagtttttgaacgctacccaaagttgggggatatg
gtcaaagacaagtttaagttcattttcgtggatgagtatcaagacacccagatcgatgtt
gtacgcattttcctggagcactttaagctaaccgagaaaagaaatatcatcggttttttt
ggtgatgccatgcaatcgatatatgacaagcgcattgggagactagatgattacagaggc
accgaagaaggacaggtaagagaggttcaaaagcggcagaataggagaaacccaaaactc
atttatgagctggctaacaaattaagaacagacggattagtgcagatccattcaacagat
aattctgctccaaacatgacggaagggaaggtgaaagaaggagagatcacttttctctat
tcagcatccggagatatcgataatgtaaaagcccacttggcctgggactttacaaactca
aaagaaaccaaagagttaaaccttactcataacctgatagcaaataaggcaagttttcaa
accttgatggatatttatgacaaggataaaatccttgaatacaagaagcgtatcaaggac
catataaagaatcatcctgttgaatgggacccaagtaaaatgacctttggtgaagtagtt
gaacgattgaaggaaggcaaaactggaaaaggtttgaaaatggtcgaaccagcaccaaag
cagcaagactttatcaaaaaaaataaaaacctttataaggtagccatggatatgaatttc
gaagttttttcaaaggtttatgtagataaggatcaactgcttgatgataaaaaacaggac
gaaaacgacttaaacaaaaaaggcagcaaacgggataacctgatccggcatctatatcgt
ctacaagaaatcatttggctttaccaaaacgagcgatactacgagtttttaaaggctact
gattataagggaaaactaggtagggtgtccgaaaaacgaaaccttaaaaataaaattgat
agtctcgttaatgttggggaaaagacaatcgaagaagtcattcaagaagcaaatgattat
ggaatctgcctgatagatgacaaattgaaaagattcgctgaaaatcagaagtacgtatac
gaccaggtgataaaagttcccttcaaagaattacaagcactttatgaatatttggaaggt
cgcactccattttcaactcaacataaaactaaggggacggaatttgataatgtcctggtc
atcctagacaatgggggatggaacaattacaattttgagtatctgttcacaaacagaacg
gataaagccagcgtacttgagcgtagtcggaagattttctacgtctgttgcacaagagct
aaagaacgtctagcggtttattattgcgatcctagccaagcggtcatcgataaagccatc
gattggttcgggagggagaatgttgtcaacttaggtgaaacccattga
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