Clostridium hylemonae: CE91St63_10510
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Entry
CE91St63_10510 CDS
T09318
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
chyl
Clostridium hylemonae
Pathway
chyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St63_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chyl03021
]
CE91St63_10510
03019 Messenger RNA biogenesis [BR:
chyl03019
]
CE91St63_10510
Transcription machinery [BR:
chyl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CE91St63_10510
Messenger RNA biogenesis [BR:
chyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CE91St63_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_25
AAA_22
Spore_III_AA
nSTAND_NTPase5
AAA_14
AAA_24
SAP
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
BDF03989
LinkDB
All DBs
Position
1132803..1134143
Genome browser
AA seq
446 aa
AA seq
DB search
MMKAKYESLPLATLKDLAKARGLKGISTMKKAELIELMLEEDEKEKKAERENVKEMSANT
GDKEVHDIDKLDSGVTARGILEVLPDGYGFIRSDNYLPGDNDVYVSPSQIRKFNLKTGDI
LEGNTRIKTQQEKFSALLYLSRINGMEPMRALRRSNFEDMTPIFPDERLRLECGKTSTAM
RIVDLLSPIGKGQRGMIVSPPKAGKTTLLKQVALSVRQNNPEIHLLILLIDERPEEVTDI
KEAIEGENVEVIYSTFDELPDHHKRVSEMVIERAKRLVEHKKDVMILLDSITRLARAYNL
TVPPSGRTLSGGLDPAALHMPKRFFGAARNMREGGSLTILATALVDTGSKMDDVVYEEFK
GTGNMELVLDRKLSERRVFPAIDIPKSGTRREDLLLSGEEQEAVDSMRRALNGMRAEEAV
DNILNMFTRTKSNNELIQMVKKTKII
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagcaaagtatgaatccctgccgcttgcaacgttaaaggacctggcaaaggcg
agaggattaaaaggaatctcaacgatgaagaaagcagagctgatcgaacttatgctggaa
gaagatgagaaggaaaaaaaggcagagcgggaaaatgtcaaggagatgtctgccaacaca
ggtgacaaggaagtgcatgatattgacaagctggacagtggggttacggcccgcggcatc
ctggaagtgcttccggacggatacggttttataagaagcgataattacctgccgggagat
aatgatgtatacgtatccccgtcacagattcggaagtttaacctgaagacaggagatatt
ctggaaggaaacacacgcatcaagacgcagcaggaaaaattcagcgccctgctctatctg
agcagaatcaacggaatggagccgatgcgcgcgctgcgccggagcaattttgaagatatg
acgcctattttcccggacgagaggcttcgtctggaatgcggcaagacaagcaccgccatg
aggatcgtcgatctgctctcgccgatcggcaaaggacagagggggatgatcgtgtcgccg
ccgaaggcaggaaagacgaccctgcttaagcaggtggcgctgtctgtgaggcagaataat
cctgagatacatctgctcatacttctcattgacgagcgtcctgaggaagtgacagatata
aaagaagcaattgaaggggaaaatgtggaagtcatctattctacatttgacgagcttccg
gaccatcacaagcgtgtgtcggagatggtgatcgaacgggccaagcgtcttgtggagcac
aaaaaggatgtcatgatacttctggacagtatcacaaggctggcgcgtgcatataacctg
acagtgccgccgtcaggaagaactctttccggcggtcttgaccctgcggcgctgcacatg
ccgaagcgtttcttcggagcggcaagaaacatgcgtgaaggcggcagccttacgatcctt
gcgactgctcttgtggacacgggaagcaagatggacgatgtcgtttatgaagaatttaaa
ggaacgggcaatatggaactcgttctggacagaaaactttccgagcgcagagtgttcccg
gccatcgacattccaaagtccggcacgagaagagaagacctgctgctttccggggaagag
caggaagcggtagattctatgagacgcgcgctgaacggcatgcgggcggaagaggctgta
gacaatattctgaatatgttcacgagaacaaagagtaataatgaacttattcaaatggta
aaaaagacaaaaataatatag
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