Clostridium hylemonae: CE91St63_15730
Help
Entry
CE91St63_15730 CDS
T09318
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
chyl
Clostridium hylemonae
Pathway
chyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St63_15730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chyl03019
]
CE91St63_15730 (pnp)
03016 Transfer RNA biogenesis [BR:
chyl03016
]
CE91St63_15730 (pnp)
Enzymes [BR:
chyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CE91St63_15730 (pnp)
Messenger RNA biogenesis [BR:
chyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CE91St63_15730 (pnp)
Transfer RNA biogenesis [BR:
chyl03016
]
Prokaryotic type
tRNA degradation factors
CE91St63_15730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
KH_5
Motif
Other DBs
NCBI-ProteinID:
BDF04511
LinkDB
All DBs
Position
1734521..1736608
Genome browser
AA seq
695 aa
AA seq
DB search
MYKKFEMELAGRKLRVDVDRVAKQANGAVLMHYGDTTVLCTATASEKPREGIDFFPLSVE
YNERLYSVGKIPGGFNKREGKASENAVLTCRVIDRPMRPLFPKDYRNDVTLENLVMSVDQ
DCSPELTAMLGAAIATTISDIPFDGPISATQVGLVDNTLVFNPTAAQKEASDMALTVAST
RDKVIMIEAGANEVPEDKMIEAIFAAHELNQKVIAFIDTIVAECGKQKHTYESCAVPEEL
FAAIRELVPPQEMEEAVFTDDKQTREENIRVITARLEEAFAEKEEWLEVLSEAVYQYQKK
TVRKMILKDHKRPDGRAVDQIRALAAEIDLIPRVHGSAMFTRGQTQICTVTTLAPLAEAQ
RLDGLDEAETSKRYMHHYNFPSYSVGETRPSRGPGRREIGHGALAERALIPVLPSETEFP
YAIRTVSETFESNGSTSQASICASSMSLMAAGVPIKAAVAGISAGLVTGDTDDDYLVLTD
IQGLEDFFGDMDFKVAGTHKGITAIQMDIKIHGLTRPIIEEAIATTKKARTFILDEVMNK
TIAEPRPEVGAYAPKIIQMQIDPQKIGDVVGQRGKTINAIIEQTGVKIDITDDGAVSICG
VEADSMAEAKRLIEIIVADFEAGQILEGKVVSIKEFGAFLEFAPGKEGMVHISKISKERI
NHVEDVLTLGDVVTVVCLGKDKMGRISFSMKDVAK
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtataagaaatttgagatggaactggccggcagaaaactccgtgtagatgtagacagg
gttgccaagcaggccaacggagcggtgctcatgcactatggagatacgacggtactctgt
acggcaacggcttctgagaagccgagagaaggaatcgacttcttcccgctaagcgttgag
tacaatgagagattgtattctgtgggcaagatcccgggaggattcaacaaaagagaagga
aaagcttccgagaatgcggtgctcacatgccgtgtcatcgacagaccgatgcgcccgctg
ttcccgaaggattaccgcaatgacgttacactcgagaaccttgtcatgtcagtggaccag
gactgcagccctgaactgacggccatgctcggtgcggcgatcgctactacgatttctgac
atcccgtttgacggaccgatttccgccacacaggtagggcttgtggacaatacacttgta
ttcaatccgacggccgcacagaaagaagcttccgatatggcgcttacggtcgcttccaca
agagataaggtgatcatgatcgaagccggggccaatgaagtcccggaagataagatgata
gaagccatcttcgccgcacacgagctgaaccagaaagtgatagcttttatagacactatc
gtggccgagtgcggaaaacagaagcatacgtatgaaagctgtgctgttccggaagagctg
ttcgctgcgatcagggaacttgttccgccgcaggagatggaagaggcagtatttacagat
gacaagcagacacgtgaggaaaatatccgtgtcatcacagccaggctggaagaagctttt
gcggagaaagaagaatggcttgaagtgctctcagaggcagtataccagtaccagaaaaag
actgtgcgcaagatgatattaaaagaccacaagcgtccggacggcagggctgtcgaccag
atcagagcgctggccgcagagatcgatctgataccgagggtacatggttccgccatgttt
acaaggggacagacacagatatgtacggtcactacactggcaccgctggcagaagcgcag
agactggacggacttgatgaggcggagacttccaagagatacatgcatcactataacttc
ccgtcttactccgtgggagagacgagaccgtcaagaggacccggacgccgtgagatcggc
catggagctctggcagagagggctctcatacctgtactgccgtcggagacagagttccca
tatgcgatccgtacggtatcagagacatttgaatccaacggatccacctcccaggcaagt
atctgtgcgtcctctatgtcacttatggcagcgggtgttccgatcaaggccgcggttgca
ggtatctccgcaggacttgtgacaggcgacacggatgacgattatcttgtgctcaccgat
attcagggactggaagactttttcggcgacatggacttcaaggttgcaggtacgcataaa
ggtatcactgcaattcagatggacattaagattcacggactgacaaggccgatcatcgag
gaagccattgcgacgacgaagaaagcaagaacctttatccttgacgaagtgatgaacaag
acgatcgcagagccgagaccggaagtgggagcgtatgcgccgaagatcatccagatgcag
atcgatccgcagaagatcggtgatgtagtgggacagcgcggcaagacgatcaatgccatc
atagagcagacaggcgtcaagatcgatattaccgacgacggtgccgtttctatctgcggc
gtagaggccgacagtatggcggaagcaaaaagactgatcgagattatcgtggcggacttt
gaggcaggccagatactggaaggtaaagtagtcagcattaaagagtttggtgcattcctt
gaatttgctccgggcaaagaaggtatggttcatatttccaagatttcaaaagagaggatc
aaccatgtagaagatgtactgacactgggagacgttgtcacggtagtatgccttggcaag
gacaagatggggcgtatctctttcagcatgaaagatgttgcaaaataa
DBGET
integrated database retrieval system
