Clostridium hylemonae: CE91St63_16310
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Entry
CE91St63_16310 CDS
T09318
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
chyl
Clostridium hylemonae
Pathway
chyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CE91St63_16310 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chyl03019
]
CE91St63_16310 (rny)
Messenger RNA biogenesis [BR:
chyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CE91St63_16310 (rny)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
BDF04569
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Position
1793797..1795350
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AA seq
517 aa
AA seq
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MPIGIVIAVAVVLVIITAAVSHFVTVSNLKKNAESKIGNAESKAREIIDDAVKTAEAKKK
ESLLEIKEESIKNKNELEKETKERRAELQRYEKRVLSKEEALDKKSEAIEKRESGFAAKE
EQLKQREAKVEELSKQRVQELERISGLTSEQAKEYLLKTVEEDVKHDTAKMIKELETQAK
EEADKKAKEYVVTAIQRCAADHVAETTISVVQLPSDEMKGRIIGREGRNIRTLETLTGVE
LIIDDTPEAVVLSGFDPIRREVARIALEKLIVDGRIHPARIEEMVEKAQKEVETMIREEG
EAAALEVGVHGIHPELIKLLGRMKFRTSYGQNALKHSIEVSQLSGLLAGEIGLDVRVAKR
AGLLHDVGKSIDHDVEGSHIQIGVDLCRKYKESATVINAVEAHHGDVEPETLIACVVQAA
DTISAARPGARRETIETYTNRLKQLEDITNQFKGVEKSFAIQAGREIRVMVVPEQVSDAD
MVLMARDIAKQIEYELEYPGQIKVNVIRESRVTDYAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
gtgccgataggaatagtaattgctgtagccgtggtgcttgttataataacagcggcagtc
agtcattttgttacggtctccaatctgaagaagaatgcggaatccaagattggaaatgcg
gaaagcaaggccagagaaattattgacgatgcggtgaagacagccgaggccaaaaaaaag
gagtctctcttggaaatcaaggaagagtctatcaagaacaagaatgagcttgaaaaagag
acaaaagaacgcagagcagaattgcagcgttatgaaaaaagagtcctttccaaagaagag
gcactggataagaagtcagaggctatcgagaagcgcgagtcagggttcgcagcaaaagaa
gaacagcttaagcagcgcgaagcgaaagtggaagagctgagtaagcagcgagtacaggaa
ctagaaagaatctcaggacttacctccgaacaagcaaaagaatatttgttaaaaactgtt
gaagaagatgttaaacatgataccgctaaaatgatcaaggagctggagacgcaggcgaag
gaagaagcggacaagaaggcaaaggaatatgtcgtcaccgccatccagagatgtgcagca
gatcatgtagcggaaactacaatttcggttgtacagcttccaagtgatgaaatgaaagga
aggatcatcggaagggaaggacgcaatatccgtaccctggagacgcttacgggcgtagag
cttattatcgatgatactccggaagccgttgtcttgtcaggctttgacccgataaggaga
gaagtggcaagaatagcgcttgagaagctgattgttgacggacgtatacatccggcaaga
attgaggagatggtagagaaagcgcagaaagaagtagagacaatgattcgtgaagaagga
gaggcggcagctctcgaggtcggcgtacatggaattcatccggagcttatcaagctttta
ggacggatgaaattcagaacaagttacggccagaatgcactgaagcattctattgaggta
tcacagctgtcaggtcttctggcgggagagatcggtcttgacgtcagagtggcgaaaaga
gcaggtcttctgcacgatgtcggaaaatctattgatcatgatgtggaaggctcacatatt
cagatcggtgtggatctctgtagaaaatacaaagaatctgcgacggtcatcaatgcggta
gaggcccatcacggggatgtagaaccggaaactttgatcgcatgtgttgtacaggcagcg
gataccatatctgcggccagaccgggtgcgagaagagaaacaattgaaacatatacaaac
aggttaaaacaattagaagatatcaccaatcagtttaaaggtgttgagaaatcttttgca
attcaggcaggtagagagattcgtgtaatggtagttccagagcaggtatctgatgcagac
atggtattgatggccagagatatagcgaagcagatagagtatgagcttgaatatcccggt
cagatcaaagtcaatgtaatccgtgaatcacgtgttactgactatgccaagtag
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