Clostridium hylemonae: CE91St63_21990
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Entry
CE91St63_21990 CDS
T09318
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
chyl
Clostridium hylemonae
Pathway
chyl03410
Base excision repair
chyl03430
Mismatch repair
chyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CE91St63_21990 (recJ)
03430 Mismatch repair
CE91St63_21990 (recJ)
03440 Homologous recombination
CE91St63_21990 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chyl03400
]
CE91St63_21990 (recJ)
DNA repair and recombination proteins [BR:
chyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CE91St63_21990 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CE91St63_21990 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CE91St63_21990 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
BDF05137
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Position
complement(2396619..2398379)
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AA seq
586 aa
AA seq
DB search
MEQWILLRKGADFEELGRKFGISPRLACLIRNRDVIGPEAVDRYLNGTITDLYDGMLMKD
MDKAVEILREKIEENRKIRIIGDYDIDGVNATYILLKGLRKSGACADSDIPDRIKDGYGL
NIELIERAYRDGIDTIVTCDNGIAASEEIAYGKRLGMTVIVTDHHEVPYESEGEEKNYIL
PAADAVIDPKQPGCGYPFKGLCGAAVAYKLIEALYEAMGNEADDLDDLLENVAVATVGDV
MELVDENRILVREGLERLRRTVNPGLGALIECTGIDREKLNSYHIGFVLGPCLNAGGRLD
TAKRALDLLCAERKKEADILAGDLKALNDSRKEMTAAAVEQAVQMIETTSLGKDRVLAVY
LPDCHESLAGIVAGRLRERYCRPAYVMTDAEDGVKGSGRSIEAYHMYEELAGCRELLTKY
GGHMMAAGFSLEKENVEQFRRRLNENCTLKESDMREKVVIDMEMPFSCVTEDIVRELKYL
EPFGNGNKKPVFAARKVELLGGQIFGKNRNVLKMRVKDAAGNETEAVYFGDTGRFCSYLE
EQYGKEALKQFLGRRRSKMTLSVTYYPEVNEYMGSRTMQIVITHYQ
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggaacagtggatactgctcagaaagggagctgatttcgaggaactggggagaaagttc
ggcatcagtccaaggctggcctgcctgatcagaaaccgggatgtgatcgggccggaggcg
gtggaccgttatctgaacggaacgatcaccgacctgtatgacggaatgctcatgaaggat
atggacaaggcggtggagatcctccgggagaagatagaagaaaacaggaagatccgtatt
attggagactacgacatagacggagtgaacgccacttatattctgctgaaaggtctgaga
aaatcaggggcttgtgcggacagtgacataccggaccggataaaggacggctacgggctg
aacattgaactgatcgaacgggcatacagggacggcatagacacgatcgtgacctgtgat
aacggaatcgcggccagtgaggagatcgcctacggcaaacggctcggcatgacggtcatt
gtgacagaccaccatgaggtgccatatgagtcggagggggaggaaaagaattatatactt
cccgccgccgacgcggtcattgacccgaagcagccgggctgcggctacccgttcaaggga
ctgtgcggggcggcagttgcctacaagctcatagaggcgttgtacgaggctatgggaaat
gaggcggatgatctggacgaccttttggaaaatgtggcggtcgccacagtgggagatgtg
atggagctggtagatgagaaccggatccttgtcagggaagggctggaacgtctgagaaga
acggtaaatccgggacttggcgctctcattgagtgtaccggcatagaccgggaaaagctg
aactcttaccatatcggtttcgtcctcggaccgtgtttgaatgcgggcggaagactggat
acagcgaagcgcgcgcttgacctgctctgtgcggaacgtaaaaaagaggcggacatactg
gcgggagacttaaaggcattgaatgacagccggaaagagatgacagccgccgcggtagag
caggcagtacagatgatcgagacgacgtctctcggaaaggaccgggttctggcggtatac
ctgccggactgtcatgaaagcctggcgggcatcgtggcgggaaggctgcgggagcgctac
tgccgcccggcatacgtcatgacagacgcggaagacggggtgaaaggttccgggcgttcc
atcgaagcttatcacatgtacgaagaactggcaggctgcagggagcttttgacaaagtac
ggcggtcatatgatggcggccgggttttcgctggagaaagagaatgtggagcagtttcgc
aggcggctgaatgaaaactgtacgctcaaggaaagcgacatgcgggaaaaagtagtgatc
gatatggagatgccgttctcctgtgtcacagaggatatcgtcagagagctcaagtatctg
gagcctttcggaaatggaaataaaaagccggtatttgccgcgagaaaggtggaactgctc
ggcggacagatatttggaaagaatagaaatgtgctgaagatgcgcgtgaaggatgcggcg
ggaaatgagactgaggctgtttatttcggtgataccggccggttctgctcctatctggag
gaacaatacggcaaagaggcgctgaaacagttcctgggccggcgaagaagcaaaatgaca
ctgtctgtgacgtattatccggaagtaaatgagtatatggggagccggacaatgcagatc
gttatcacgcattaccagtaa
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