Campylobacter hyointestinalis: CHH_0162
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Entry
CHH_0162 CDS
T04651
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
chyo
Campylobacter hyointestinalis
Brite
KEGG Orthology (KO) [BR:
chyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chyo03032
]
CHH_0162 (topA)
03400 DNA repair and recombination proteins [BR:
chyo03400
]
CHH_0162 (topA)
Enzymes [BR:
chyo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CHH_0162 (topA)
DNA replication proteins [BR:
chyo03032
]
Prokaryotic type
DNA Topoisomerases
CHH_0162 (topA)
DNA repair and recombination proteins [BR:
chyo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CHH_0162 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_TFIIB
DNA_ligase_ZBD
ADK_lid
Zn_ribbon_LysW
Zn_ribbon_8
Toprim_4
Toprim_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ANE31879
LinkDB
All DBs
Position
151100..153184
Genome browser
AA seq
694 aa
AA seq
DB search
MSKLIIVESPAKAKTIKNFLGDGYKVIASKGHIRDLPKSSFGIKIEDDKFSPEYRVSSDH
SAIVKEIKELAKNADTIYLATDEDREGEAIAYHIAMAIGKKPESMPRIVFHEITKSAIQS
ALKSPRTLDMNSVNAQQARRLLDRIVGYKLSPLLNAKIQRGLSAGRVQSSALKILVDRER
EIREFKPIEYFSIDTKFKKDIEAELIQFENQKIEKLTITNSERANFIVERLKFEEFSVDN
IESKERKTSPQPPFMTSTLQQSASNRLGFSPKKTMMLAQTLYEGVQTNNGFMGAITYMRT
DSLNLAKEAVESARKLIKSEFGDKYLPSKAQIYATKSKGAQEAHEAIRPTNLSFTPEIAA
NFLEKDLLKLYTLIYNRFLSSQMSPSVSVLQSVFVKSASAVYKISGRKVIFDGFYKVYGD
LDKDKILPNLNVADRLELQNIKSQSHFTEPPTRYSEAGLVKKLESLGIGRPSTYAPTISL
LTSRDYVKIEKKQLIPNEIAFSITEVLEHHFNDIVDSEFTSKMEEKLDDIAENKADWQEV
LSGFYHPFMQKINDGKTNIKSQKVAEPIGEKCPDCGGELVKRKGRFGEFIACLNFPKCKY
SRNLNGVDKFEKKEPAKIGIKCPDCGGELVERFGKKGKFYGCSNYPKCNFISKYKPTGEN
CPNCGKPMVLKELKKGNFKECPQCKFKKEVTNDE
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaattgataatcgtagaatccccggcaaaagcaaaaactataaagaatttttta
ggcgacgggtataaagtcatagctagcaaaggccacataagagaccttccaaagtcgagt
tttggtatcaaaatagaagatgataaattctctccagagtatagggttagcagcgaccac
tccgcaatagtcaaagagataaaagagcttgctaaaaatgcagatacaatctatcttgcg
actgatgaagatagagaaggtgaggcgatcgcgtaccatatcgctatggcgatcggaaag
aagcctgagtcgatgccgcgtatcgtttttcacgagataactaaatcagccatacaaagt
gcgcttaaaagcccaagaacgcttgatatgaacagcgtaaatgctcagcaagcaaggcgg
cttttagataggatagttggctacaagttaagtccgcttttaaacgcaaaaattcagcgc
ggtcttagtgcaggacgcgtccaaagctcagcgcttaaaatcctagtcgatcgtgagcgt
gagattagagaatttaaacctattgagtattttagcattgatactaaatttaaaaaagac
attgaagctgaacttatacaatttgaaaatcaaaagatagaaaaacttactattacaaac
tctgagcgtgcaaattttatagtagagcgtcttaaatttgaagaatttagtgtagataat
atcgaaagcaaagagagaaaaactagcccacaaccgccatttatgacttctactttgcaa
caaagcgcgtcaaatcgtttgggctttagtcctaaaaagactatgatgctagcacaaact
ttgtacgaaggcgtgcagacaaataacggatttatgggagctatcacatatatgagaaca
gatagcttaaatttagccaaagaagcagttgagtctgcaagaaagctcataaagagcgaa
tttggagataaatacttaccctcaaaagctcaaatttacgctactaaaagcaaaggagcg
caagaagctcatgaggctattcgccctacaaatttgagctttactccagagattgcggct
aattttttggaaaaagatctgctaaaactttatactctcatttataatagatttttatcg
tctcagatgagtcctagtgtatctgtgcttcaaagcgtatttgttaaaagtgcaagtgca
gtgtataaaatatctggtagaaaagtcatatttgatggattttataaagtttatggcgat
cttgataaagataagatcctaccaaatttaaatgttgcagataggctagaactgcaaaat
ataaaatcacaaagtcattttaccgagccacctactagatatagcgaagctggtcttgta
aaaaaactagagagcttaggtataggcagaccgtctacttatgcaccgactatttcgctt
ttaactagtcgtgattacgtaaaaatagaaaaaaaacagctcattccaaatgagatcgca
tttagcataaccgaggttttagaacatcattttaacgatatcgtagatagtgaatttacg
tctaaaatggaagaaaaacttgatgatatagctgaaaataaagctgattggcaagaagta
ttgtccggtttttatcatccttttatgcaaaagataaatgatggaaaaacaaatataaaa
agccaaaaagtagctgagcctataggtgaaaaatgccctgattgcggtggagaactagtc
aaaagaaaaggtagatttggcgagtttatagcttgtttgaattttccaaaatgtaaatac
agtaggaatttaaacggagttgataaatttgagaaaaaagaacctgctaagatcggtata
aaatgccctgattgcggtggtgaattagtcgagagatttggtaaaaaaggtaaattttat
ggctgttcaaactatccaaaatgtaattttataagcaaatacaaaccgactggagaaaac
tgtccgaactgcggtaagcctatggtcttaaaagagctaaaaaagggtaatttcaaagag
tgtccccagtgtaaatttaaaaaagaggtgacaaatgacgaataa
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