Campylobacter hyointestinalis: CHH_0940
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Entry
CHH_0940 CDS
T04651
Symbol
uvrB
Name
(GenBank) UvrABC nucleotide excision repair complex, subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
chyo
Campylobacter hyointestinalis
Pathway
chyo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
chyo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHH_0940 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chyo03400
]
CHH_0940 (uvrB)
DNA repair and recombination proteins [BR:
chyo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHH_0940 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CHH_0940 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
SWI2_SNF2
Kinesin
AAA_30
UB2H
Microtub_bd
AAA_22
DUF1574
Focal_AT
AAA_18
Flavoprotein
AAA_16
AAA_7
DUF87
Motif
Other DBs
NCBI-ProteinID:
ANE32594
LinkDB
All DBs
Position
883457..885433
Genome browser
AA seq
658 aa
AA seq
DB search
MDKFEISSKFKPSDDQEKAVTNIVDSIKSGNKFNVLLGVTGSGKTFTMANVIKRLNMPTL
IMTHNKSLAAQLYSEFKGFFPKNHVEYFISYYDYYQPEAYIPRQDLFIEKDSSINDELER
LRLSATANLLEFDDVIVVASVSANYGLGNPAEYKGMVLLLNIGMSLNQKELLLKLVDMGY
KRNDSYFDRGDFRVNGDVVDIYPAYFNDEAIRLEFFGDELDAMYHFDVLENRRTKDVSKF
ILYATSQFVVGENRLKQAIKDIELELEDRLAFYEKENRLVEYQRLKQRVEFDLEMLSSTG
STKGVENYARYLTGQKPGETPYSLFDYFEVSGKDYLVIVDESHVSLPQFRGMYAGDRSRK
EVLVEYGFRLPSALDNRPLKFDEFIAKKANYLFVSATPNEYEMDLAKGHIYEQILRPTGL
LDPRIEVISSDNQVEVLFDRAKVVIARNERVLVTTLTKKMSEELTRYYLELGIKVKYMHS
DIDAVERNELIRGLRKGEFDMLIGINLLREGLDLPEVSLVAVLDADKEGFLRSRTSLIQT
MGRAARNVNGTVILFANKITNSMKEAIEITEARRKYQDEYNKKHGITPRSASRNLEDSLK
EEDLPNLYNKAKKLEKMPVSERAKIVKELRKQMLEAAKNLEFEKAAALRDEIAKLREL
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgagatatctagtaaatttaagccaagcgatgatcaagaaaaagccgta
acaaacatagttgatagcataaaatctggaaataaatttaacgtcctcttaggagtaact
ggaagtggcaagacttttacgatggcaaacgtgataaaacgcctaaatatgccaactctc
attatgacacataacaaaagcttagcagcacaactttatagcgaatttaagggctttttt
cctaaaaatcacgttgagtattttataagctactatgattattaccaacctgaagcctat
ataccgcgtcaagatctttttatagaaaaagatagctctataaatgatgagcttgagcgt
ttaagacttagtgcgactgcaaatttgctcgagtttgatgatgtgatagtagtggcttct
gtatctgcaaactacggtttaggaaatcctgctgagtataaaggtatggttttgttacta
aacataggtatgagcttaaatcaaaaagagctacttttaaagcttgttgatatgggatat
aaaagaaatgattcgtactttgatcgtggggattttcgagtaaatggcgacgtggtagat
atctatccggcgtattttaatgacgaggctataaggcttgagttttttggagacgagctt
gacgcgatgtatcactttgatgtgttagaaaacagacgtacaaaagacgttagtaaattt
atactatatgcgacaagtcagtttgtagtcggagaaaatagactaaaacaggcgataaaa
gatatcgaacttgagcttgaagatagacttgcattttatgaaaaagaaaatagattagtc
gagtatcaaagacttaagcaaagagtggagtttgacctcgagatgctctcaagcaccgga
agcacaaaaggcgtggaaaactacgcacgttacctaactgggcaaaagcctggagagacg
ccatactctttgtttgattactttgaagtcagtggcaaggactaccttgttatagtagat
gaaagtcacgtgagcttgccgcaatttcgcggaatgtacgcaggcgatagaagcagaaaa
gaagttttggttgagtatggttttagacttccatcagcgcttgataatagacctttgaaa
tttgatgagtttatagcaaaaaaggcaaactatctgtttgtttcagccaccccaaacgag
tatgagatggatctcgcaaaaggtcatatttatgagcaaatacttaggcctactggactt
cttgatccacgtatagaagtcataagcagcgataatcaagtagaagttttgtttgataga
gctaaagttgtcatagcaagaaatgagcgagtactagtaactactctaactaaaaagatg
agtgaagagctaactcgatattaccttgagcttggtatcaaggttaaatatatgcactca
gacatcgacgcagtagaaagaaatgagcttataagaggtcttagaaaaggtgagtttgat
atgcttatcggtataaatttgcttcgtgaggggctagatctaccagaagtctctttagta
gcagttttagacgccgataaagagggttttttaagaagtcgcacgagccttatacaaact
atgggaagagcagctagaaacgtgaatggaacggttatattatttgcaaataaaataaca
aattcgatgaaagaagcgattgaaataaccgaggctaggcgaaaatatcaagatgaatac
aacaaaaagcatggcataactccacgctcagctagtagaaatttagaagatagcctaaaa
gaagaagatctaccaaatttatataataaagccaaaaaactagaaaaaatgccagtaagc
gagcgagcaaagatcgtaaaagagctaagaaaacagatgcttgaagcggccaagaatttg
gaatttgaaaaagctgcggccttgagagatgagatagcaaaactcagagaactttaa
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integrated database retrieval system
