Campylobacter hyointestinalis: CHH_1204
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Entry
CHH_1204 CDS
T04651
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
chyo
Campylobacter hyointestinalis
Pathway
chyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
chyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CHH_1204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
chyo03019
]
CHH_1204
Messenger RNA biogenesis [BR:
chyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CHH_1204
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KH_2
MurD-like_N
DUF5680
KH_KhpA-B
DNA_pol_B_thumb
Motif
Other DBs
NCBI-ProteinID:
ANE32844
LinkDB
All DBs
Position
complement(1150667..1152220)
Genome browser
AA seq
517 aa
AA seq
DB search
MIEIFIGLTAAVAGAGAGYFAAKKINDANYNVFLEQAKAKAKAIEFEAESILKDAKVKVS
EAEFEAKKRYEEKGSKLQKEFNQKFDEIAKKEQVLLSEHEILKNSKEELEKSRNEAKTLY
EEGLNLKATYQDKLSEALRVLEHSAGLTEEEAREVVLKKVEEKSRADIAHIVRKYEEEAK
REAKKRVNYILAQATSRYAGEFAAERLINVVNIKNDELKGRIIGKEGRNIKTLEMVLGVD
VIIDDTPHAIVLSSFNLYRRAIATRVIELLVEDGRIQPARIEELHKKVCDEFEESILEEG
ENILIDLGISKVHPEIVKLIGKLKFRASYGQNALAHSLEVAHLAGIIAAETGGDEKLAKR
AGILHDIGKALTHEYEGSHVDLGAEICKRYKEHPVVINAIYAHHGHEEALSVECAAVCAA
DALSAARPGARREVLESFLKRVEEIENIATSKEGIKGAYAINAGREIRVIANAKLVNDDE
AVLLAKEIADEIQEKVQFPGEIKVNVIRELRAIEFAK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgatagagatttttatagggctcactgccgcggtagcaggcgctggagcagggtatttt
gcagccaaaaagataaatgatgcaaactataatgtctttttggagcaagcaaaagcaaaa
gcaaaagctatagaatttgaagcagaaagcatactaaaagatgcaaaagtaaaggtaagc
gaagctgagtttgaagcaaaaaaaaggtatgaagaaaaaggaagcaaacttcaaaaagaa
ttcaatcaaaaatttgatgaaattgcaaaaaaagaacaagttcttttaagcgaacacgaa
attttaaaaaatagcaaagaagagctagaaaagtcaagaaatgaagcaaagactctttat
gaagaaggtctaaatttaaaagcgacttatcaagataaacttagcgaagcgcttagggtt
ttagagcattctgctggacttacagaagaagaagcgcgtgaagttgtactaaagaaagtg
gaagaaaaaagtcgcgcggatatagctcatattgttagaaaatacgaagaagaggctaaa
agagaggcaaaaaaaagagtaaattatatccttgcgcaagctactagtagatacgcagga
gagtttgcggctgaacgtcttataaatgtcgtaaatatcaaaaacgacgagttaaaagga
cgcatcataggcaaagaagggcgcaatataaagactcttgagatggtgctaggagttgat
gtcatcatagacgatacgcctcacgctatagttttatctagttttaatctgtatcgccgt
gctatcgctactagggttatagagcttttggtagaagacggaagaatccaaccggctcgt
atcgaagagctacataaaaaagtttgcgatgagtttgaagagagtattttagaagagggt
gaaaatatcttgatagatcttggtattagtaaggtgcatcctgagatcgttaaacttata
ggtaagcttaaatttagagcaagttacgggcaaaacgctttggctcatagtcttgaagtt
gctcatctagcaggcatcatcgctgctgagacaggcggagacgaaaaactagctaaacgt
gctggaatattacatgatataggtaaagcattaactcatgagtatgagggaagccatgtt
gatttgggtgctgaaatttgtaagcgttacaaagaacatccagtagttataaatgctatt
tatgctcaccatggacatgaagaagctttaagcgtagaatgtgctgcagtttgtgctgca
gatgcactttctgcggcacgccctggtgctagaagagaagtgcttgagagcttcttaaaa
agagttgaagagatagaaaatatcgcaactagcaaagaagggatcaaaggagcttatgct
ataaatgcgggacgtgaaataagagttatagcaaatgctaagcttgtaaatgacgatgaa
gccgtgctacttgcaaaagaaatagctgatgagatacaagaaaaagtgcagtttccaggt
gagataaaagtaaatgttataagagaacttagagcgattgaatttgctaaataa
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