Chryseobacterium sp. StRB126: CHSO_1186
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Entry
CHSO_1186 CDS
T03602
Name
(GenBank) uvrd/rep helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chz
Chryseobacterium sp. StRB126
Pathway
chz03420
Nucleotide excision repair
chz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHSO_1186
03430 Mismatch repair
CHSO_1186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_1186
Enzymes [BR:
chz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHSO_1186
DNA repair and recombination proteins [BR:
chz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHSO_1186
MMR (mismatch excision repair)
Other MMR factors
CHSO_1186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
ResIII
UCH
EAD8
DEAD
Motif
Other DBs
NCBI-ProteinID:
BAP30223
UniProt:
A0A077KG90
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All DBs
Position
1367208..1369541
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AA seq
777 aa
AA seq
DB search
MDYLKGLNESQYEAVTSLQGPLMVLAGAGSGKTRVLTMRIAHLIHNGIDPFNILALTFTN
KAAREMKERIAKVVGDSNARSLWMGTFHSVFARILRIEAHYLGYPSNFTIYDQQDALNVI
KKVLKDMNIDADLYKPKKVQARISTYKNNLITVKAYFNNPELMEADEKANMKFIGQIYQR
YVEQCFKNGSMDFDDLLLKTNELLTRFPEVLAKYQDRFRYIMVDEYQDTNHSQYLIVKAL
ASKFENICVVGDDAQSIYSFRGANIYNILNFKKDYPDAITVSLEQNYRSTQNIVNAANVV
IAKNLQQFKKNVFSDNEEGDKIKIYRSLSDADEANFVAGNIWELRNRDQRKYSDFAILYR
TNSQTRAFEDALRRKNIPYKVYGGLSFYQRKEVKDLIGYLRLLINENDSEALMRIINYPT
RGIGETTQNKLIVFADAQNLPVSKVLDNLPIYAPQLGLNNGVLNKLNDFWSMIKAFQVLL
KTETAYSVAMEVAKRSGLIKFLKDDQTPEGISRVENVQELMNSMQGFIEEQMQLEDGDPS
LSNFLENIALSADTQDKDQEDDMVSLMTIHLSKGLEFPVVHLVGLEENLFPSFMSSATRE
DLEEERRLFYVALTRAEKQVFFSYAVSRFQWGKITDAEPSRFLSEIDDEYIEFLNPAMEK
RFINNAGVKSNIFDEHPSEMKSFKKVEKKTLNRGEDNSKPAPEARKLKPVSTAKIINPSG
ASSQDIEVGDKVRHDRFGIGEVAFLDGTDPQNIKAKVVFIHEGEKNLILKYAKLTKI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggattatctgaaaggactcaatgaatcacaatatgaagccgttacctctttacaaggc
cctctgatggtgcttgcaggagcaggttccggaaaaacacgtgtgcttaccatgcgtatt
gcccaccttatccataatggaatagaccctttcaatatcctggcacttacctttaccaat
aaggcagcgcgtgaaatgaaagaacgtatcgcaaaggtagtaggagacagtaatgcaaga
agtctttggatgggaacatttcactcggtttttgcaagaattttaagaattgaggctcat
tatctgggctatccttctaattttaccatttatgaccagcaagatgctctgaatgtaatt
aaaaaagtattgaaggatatgaatattgatgctgatctttataaacccaagaaagttcag
gcaagaatttcaacctacaaaaacaatctgattaccgttaaagcttatttcaacaatccg
gaactgatggaggctgatgaaaaagccaatatgaaatttattggacagatttatcagaga
tatgttgaacagtgtttcaaaaacggatctatggattttgatgatttattgttaaaaacc
aatgaactgttgacgcgtttccctgaagtattggcgaaatatcaggacagatttagatat
atcatggtagatgagtaccaggataccaaccactcacagtatcttattgtgaaagcatta
gcttccaagtttgaaaatatatgtgtggtaggagatgatgcccagtctatttactcgttc
cgtggagctaatatctataacatcctgaactttaaaaaagattacccggatgccattaca
gtatcattggaacaaaattaccgttctacacaaaacattgtaaacgcagccaatgttgtt
attgcgaaaaacttacagcagtttaagaaaaacgtcttcagtgataatgaagaaggagat
aaaattaaaatttaccgttctctctctgatgctgatgaagcaaacttcgtagccggaaat
atctgggaacttcgtaaccgtgaccagagaaaatatagcgattttgctattttgtataga
accaactctcagacccgagcatttgaagatgccctgagacgtaaaaatattccgtacaaa
gtgtatggaggactttcattctaccaaagaaaagaagtgaaagatttaattggatacctg
cgtcttttaattaatgaaaatgactcggaagcattgatgagaatcatcaactatccaacc
agaggaattggagaaacaacgcaaaataaattgattgtttttgcagacgctcagaacctt
cctgtatcaaaagttttggataatcttcctatttatgctcctcaactagggctaaacaat
ggtgttttaaataaattgaatgatttctggtcgatgattaaagcattccaggtattgttg
aaaacagaaacagcttacagcgttgctatggaagtggccaaacgaagtggtttgattaag
tttttaaaggatgaccagactccggaaggaatttcaagagtagaaaacgttcaggaatta
atgaactctatgcaagggtttattgaggaacaaatgcaattggaagatggagatccgagt
ctttccaacttccttgaaaatattgctctgtcagctgatacccaggataaagatcaggaa
gatgatatggtttcattgatgaccattcacctttccaaaggtcttgaatttcctgtagtt
catttagtaggtcttgaagaaaaccttttcccaagttttatgagttctgccacaagggaa
gatcttgaggaagaaagaagattgttctatgttgcattaaccagagctgagaagcaagtg
tttttctcttatgcagtatcccgtttccaatgggggaaaattactgatgcagaaccatca
agattcctgagtgagattgatgatgaatatattgaattccttaatccggcaatggagaaa
aggtttatcaataatgcgggagtgaaatccaatatttttgatgaacatccatctgaaatg
aaatcttttaagaaggtagagaaaaagacgcttaacagaggtgaagataattcaaaacct
gctccggaagcaagaaaactgaaaccggtaagtactgccaaaattattaatccaagcggt
gcatcatctcaggatattgaagtgggagataaagtaagacacgatcgtttcggaatagga
gaggttgctttcctggatggaacagatcctcagaatatcaaagcaaaagtggtattcatc
catgaaggggagaagaacctgattctgaaatatgctaaacttacgaagatttaa
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