Chryseobacterium sp. StRB126: CHSO_1617
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Entry
CHSO_1617 CDS
T03602
Name
(GenBank) tRNA pseudouridine synthase b
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
chz
Chryseobacterium sp. StRB126
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
chz03016
]
CHSO_1617
Enzymes [BR:
chz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CHSO_1617
Transfer RNA biogenesis [BR:
chz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CHSO_1617
Prokaryotic type
CHSO_1617
BRITE hierarchy
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DNA_ligase_A_M
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BAP30654
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All DBs
Position
1876394..1877098
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AA seq
234 aa
AA seq
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MTAEELKSGYIFLLDKPLDWTSFQAVNKMKYKLKREFDLPKKFKIGHAGTLDPRATGLLI
VCCGKFTKKIPEIQDAPKEYWTEIKIGVQTESYDTEKPEILHQDIVHITEEQVKEVLEKF
VGEIEQKPPVYSAIKIDGERAYNLARAGEEVEMKSRKTTIHYLNDIKIDFPLISFTVGCS
KGTYIRSLAHDIGQELGVGAYLTQLRRTKIGEYKIEDATDQFLSNDFRFLANEK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggaagaactgaaatcaggatacatatttttattagataagcctttggactgg
acttccttccaggctgttaataaaatgaaatataaattgaaaagggaatttgaccttcct
aaaaaatttaaaatcggacatgcaggaaccctggacccaagagcgactggacttctcatt
gtttgttgcggaaaattcaccaaaaagattcctgaaattcaggacgcacctaaagaatac
tggacagagatcaaaataggagttcaaacagaatcctacgatactgaaaaaccggaaatt
cttcatcaggatatagtccatatcacagaggagcaggtaaaagaagttttggaaaaattc
gttggggaaattgaacaaaaaccaccggtgtattctgccataaagattgatggtgaaaga
gcctataatctggctagagcaggagaggaagtagaaatgaaatccagaaaaacaacgatt
cattatctcaatgatataaaaatagattttcctttgataagttttaccgttggatgttca
aaaggtacttatatcagaagtttggcccatgatatcggccaggaattaggtgtaggtgct
tatttgacacaattgagaagaacaaaaatcggagagtataaaattgaagatgctacagat
cagtttttaagtaacgattttagatttttagcgaatgaaaaatga
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