Chryseobacterium sp. StRB126: CHSO_2698
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Entry
CHSO_2698 CDS
T03602
Name
(GenBank) RNA polymerase, sigma 70 subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
chz
Chryseobacterium sp. StRB126
Pathway
chz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CHSO_2698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
chz03021
]
CHSO_2698
Transcription machinery [BR:
chz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CHSO_2698
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
DUF6285
DUF7443
Motif
Other DBs
NCBI-ProteinID:
BAP31735
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Position
3079240..3080106
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AA seq
288 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVELITADEEVELAQRIRAGDRAALEKLIKANLR
FVVSVSKQYQNQGLSLPDLINEGNLGLMKAAKRYDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKAYAHLEQENERPPSPEELAEVLDMSEEDIKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPSPDKDLMLESLQIEIERALNTLTPREADLVRLYFGL
NGKHPMTLEEIGETFDLTRERVRQIKEKAIKRLKHNTRSKILKSYLGK
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaatcactaagcaggttaccaacagggaaactgcttcattagacaag
tatttgcaggaaattggtaaagtggaactgattactgcggacgaggaagtagaattggca
caaagaatacgtgctggcgatagagctgcattggaaaaattaattaaagccaaccttcgt
ttcgtagtttctgtatctaaacaataccaaaaccaaggtctttccttacccgatttaatt
aatgaaggtaacttaggattaatgaaggcggcaaaaaggtacgatgaaactagaggtttc
aaatttatctcttatgcagtatggtggatccgtcaatcaattttacaggcgttggctgag
caatcaagaattgtaagacttccgttgaacaaaattggttccatcaataaaattaataaa
gcatacgctcaccttgaacaggaaaatgaaagaccaccttctccggaagaattggctgaa
gttcttgacatgagtgaggaagatattaaagaatctatgaaaaactccggtagacacctg
tctatggatgcccctttagtagaaggtgaagattctaatctttatgatgtattacgttca
ggtgaatctccaagtcctgataaagacttaatgcttgaatctcttcagattgaaatcgaa
agagcattgaacactttaactccaagagaggcagatttggtaagattatacttcggattg
aacggaaaacacccaatgactttagaggaaattggtgagactttcgatcttacaagagag
agagttcgtcagatcaaagaaaaagcaattaagagactaaaacacaataccagaagtaag
atccttaaatcttatttaggtaaataa
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