Chryseobacterium sp. StRB126: CHSO_2895
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Entry
CHSO_2895 CDS
T03602
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
chz
Chryseobacterium sp. StRB126
Pathway
chz03420
Nucleotide excision repair
chz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CHSO_2895
03430 Mismatch repair
CHSO_2895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_2895
Enzymes [BR:
chz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHSO_2895
DNA repair and recombination proteins [BR:
chz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CHSO_2895
MMR (mismatch excision repair)
Other MMR factors
CHSO_2895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
Viral_helicase1
AAA_11
DEAD
ResIII
ATPase
RNA_helicase_helical
Motif
Other DBs
NCBI-ProteinID:
BAP31932
UniProt:
A0A077KJL7
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All DBs
Position
3288340..3290145
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AA seq
601 aa
AA seq
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MFIWEKDSINKEQEDAILEDNSVLLIACPGSGKTRTLTFKIAYELSRLKSDKEFVIAITY
TNRASDEIKERVELLGVDTTQLWIGTIHSFCMEWILKPYHLYSERLKNGFKVINSFDSEK
ILTELCAPYKKEKITYYDCGILAKPDGFYLTCLDSGKHNSLKKILGEYFKVLEKKRQIDF
EQILFYSYEILKSKPVIANILCKLFPFVLIDEYQDTKEIQYHIISKILSVSKGASKTLIV
GDPNQSIYDSLGGYPMPKDELEKLLGFELTPLSLDKNYRSSSAIISYFDYYKTFDTPIVA
FGNGKDYSSSITFNSSVSVDNLIEELAQLILYNVEKAGISPNEICITAPQWVHIASITRK
LIIRLPDFSFDGPGMAPFSRDIDNFWFKVSRIALTEPSPFMYVRRLRWSNEILNELDSTG
VDVSNMTSKKFLRICNSLEIIEKDGLTYLRTFFNQICEKLKIALPNFPLLDEHFNSFFAS
SESRIQRLIDEGNPYIGDIENFRKVFRQRDGITVSTIHGTKGEEYDTVIGFGLLDGYVPH
FNDNNGLENSKKLLYVLASRARKNLHLISERNRNVHKFYAPDGKPPTSHLTDYNFKYLDT
L
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgtttatttgggaaaaagacagtatcaataaagaacaggaagatgcaattcttgaagat
aatagcgtacttcttattgcttgtcccggaagcggtaaaacgagaacccttacattcaaa
attgcttatgagttaagcaggttgaaatcagacaaggaattcgttatagccataacctac
actaatagggcttccgatgaaattaaggaacgagttgaattattaggcgttgatacaaca
caattatggataggcactatccattctttttgtatggaatggattttaaaaccataccat
ctgtattctgaaagattgaagaacggttttaaggtcatcaattcctttgattcagagaag
attttaaccgaattatgtgccccctataagaaagagaaaataacatattatgattgtggt
attcttgccaaaccggatggtttttacttaacctgtcttgatagtggtaaacataattca
ttaaagaagattcttggagaatattttaaagttcttgaaaaaaagcgacaaattgatttt
gagcaaatcttattttattcttatgaaattctcaaatcaaaaccagttatagctaatatt
ttgtgcaaattatttccgtttgttttaattgacgagtatcaagataccaaagaaatacag
tatcatattatatccaaaatattaagcgtaagcaaaggagcttcaaaaacactgatcgta
ggtgatccaaatcaatctatttacgattcactgggagggtatccgatgccgaaagatgaa
ttagaaaaattattaggatttgaattgactccattaagccttgacaaaaactataggtca
tcctctgctattattagctattttgattattataaaactttcgataccccaattgtagcc
tttggaaatggaaaagattattcaagttcaatcacatttaactcttccgtttcagtagat
aatttaattgaagaattggctcagttaatattgtataatgttgagaaagcagggattagt
cccaatgaaatatgcatcactgcaccacaatgggtacacatagcaagtattacaagaaaa
cttatcattcgacttcctgatttcagttttgacggaccagggatggcaccgttttctcgg
gatattgataatttttggttcaaggtttcaagaattgcattgacagaaccatctcctttt
atgtatgtaagaagattaaggtggagcaatgaaattttaaatgaacttgattccacagga
gttgatgtttcaaatatgactagtaagaaatttttaagaatttgtaattctttggagatt
atcgagaaagatggattaacttatctaaggactttttttaatcagatctgtgaaaaactg
aaaattgcattacccaattttcctttgttagatgaacatttcaattcattttttgcaagt
tctgaaagtagaattcagaggctgattgatgaaggaaatccatatattggtgatattgaa
aatttcagaaaagtattcagacagcgagatggaattacagtatccactatccacggcacc
aagggcgaagaatacgatacagttataggttttggcttgttagatggctatgttcctcat
tttaacgataataatggtcttgaaaattcaaagaagctattatatgtcttagcttcaaga
gcgagaaaaaatttacatcttatttcggaaagaaatagaaatgtacataagttttatgct
ccggatggaaaacccccaacttcacatttaactgattacaatttcaaatatttagatacc
ctgtaa
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