Chryseobacterium sp. StRB126: CHSO_3052
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Entry
CHSO_3052 CDS
T03602
Symbol
phr
Name
(GenBank) putative deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
chz
Chryseobacterium sp. StRB126
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_3052 (phr)
Enzymes [BR:
chz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
CHSO_3052 (phr)
DNA repair and recombination proteins [BR:
chz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
CHSO_3052 (phr)
Prokaryotic type
CHSO_3052 (phr)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
BAP32089
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Position
complement(3460231..3461514)
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AA seq
427 aa
AA seq
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MNKVNIFWFRRDLRLNDNIGLHHALSTGLKVIPVFIFDTDILDQLQNKNDKRVDYIHQAL
QEIHKDLKKHNSGLYVYHGTPIEVFKRIIRDFNIDTVFSNRDYEPQALQRDRQVADLLLK
HHIQFKNFKDQVIFEKNNILKNDLSPYTVFTPYSKKWKENLKNIESVTINLAQFADYNGS
SEIISLKEIGFEKTDLEFIKPVLESSIIDSYDKYRDFPAMDHTSHLGTALRFGIISIRKC
VKYAVKHNEGWLNELIWREFFMQILYHFPSVVHQCFKKKYENIVWRNNEKEFKAWCEGKT
GYPIVDAGMRQLNETGFMHNRLRMITASFLTKHLLIDWRWGEAYFAEKLLDYDLAANNGN
WQWAAGCGCDAAPYFRIFNPYEQTKKFDKDTQYIRRWLPEDYNEEPIVEHAKARERVLKA
YKEALAE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagtgaatattttttggttcagaagagatcttagattgaatgataatataggg
cttcatcatgcactgagtacaggattaaaggttattccggtttttatttttgatactgat
atactggatcaacttcagaataaaaatgataaaagagtagattatattcatcaggcttta
caggaaattcataaagatctgaaaaaacataacagtggtctttatgtttatcatggtact
ccaatagaagtatttaaaagaataatccgggattttaatattgatacggtctttagcaac
agagattatgaaccgcaagccctacaacgggaccggcaggtagctgatttgctgttgaaa
catcatattcaatttaaaaattttaaggatcaggttatttttgagaaaaataatattttg
aaaaatgatctttctccctatactgtttttaccccatactcaaagaaatggaaagaaaat
ttgaagaatatagaatcggttactataaacctggcacagtttgcagattataacggatct
tctgaaatcatttcattaaaagaaattggatttgagaaaacagatcttgaatttataaaa
ccggtgctggagagcagtataatagattcttatgataagtaccgggattttcctgcaatg
gatcataccagtcatcttgggactgcacttcgttttggaattatttcaattcgcaaatgt
gtaaaatatgcagttaagcataacgaaggatggcttaatgaacttatatggagagaattt
ttcatgcagattctgtatcattttccaagtgttgttcatcaatgttttaaaaagaaatat
gagaatattgtgtggaggaacaatgaaaaagaatttaaggcgtggtgtgaaggtaaaacc
ggatatccaattgtagatgccggaatgagacagctcaatgagacaggatttatgcacaac
agactaagaatgatcacagcaagtttccttactaagcatttgcttattgattggaggtgg
ggagaggcctattttgccgaaaagctgctggactacgatttggctgccaataatggaaac
tggcaatgggcggcaggttgtggttgtgatgctgcgccttattttaggatattcaatccc
tatgagcagacaaaaaagtttgataaagatactcaatatatcagaaggtggcttccggaa
gattataacgaagaacctatcgtagaacatgcaaaagccagagaaagagtattaaaggct
tacaaagaagcactggcagaataa
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