Chryseobacterium sp. StRB126: CHSO_3305
Help
Entry
CHSO_3305 CDS
T03602
Symbol
xylB
Name
(GenBank) putative alpha-N-arabinofuranosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
chz
Chryseobacterium sp. StRB126
Pathway
chz00520
Amino sugar and nucleotide sugar metabolism
chz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
CHSO_3305 (xylB)
Enzymes [BR:
chz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
CHSO_3305 (xylB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
BAP32342
UniProt:
A0A077KKV9
LinkDB
All DBs
Position
complement(3746753..3748456)
Genome browser
AA seq
567 aa
AA seq
DB search
MNLAFFRNKKHIIAAAALLSVTTISAQTFSDFNYRGNDKIYNDNPLKPDEFYSPILQGCY
PDPSITRKGKDYYLVNSSFSMFPGVPIFTSKDLVNWKQVGHVLDRPSQLKVEKSGVSHGI
YAPDIKYNKHNDTFYMITTQFAGGIGNMVVKTKDPSKGWSEVQKLNFDGIDPAIFFDDDG
KAYIVHNDAPPKDTEQYNGHRVIKMWDYDLEKDQVVPDSDKIIVNGGVDLSQKPIWIEGP
HIYKKNGKYYLMCAEGGTGGNHSEVIFMSDSPKGPYVPAGNNPILTQRYFPKDRKEKVDW
AGHADLVETPDGQYYGVFLAIRPNEKNRVNKGRETFILPVDWSGKYPVFQNGLVPMKPKL
KMPQGVQNQTGQNGFFPNGNFTYNDKLTDKDLDFRWIAMRGPRENFITVTKNGIKVNPME
TNIKSLAPVSALFHRLQHEDFETSVTLDFKPKSEKELAGITCYQSETFNYVFGITKKDKD
FYIVLERTEKGESKLIASEKISLSKPVKLQVVADKDEHSFNYSLDGKSYKNLGGPVSGDI
LSTDVAGGFTGSLIGLYSTSSNDIVPQ
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcttttttcaggaataaaaaacatatcattgcagcagctgctttgctctca
gtgactactatttctgcacaaactttctcagactttaactaccgtggaaacgataaaata
tataatgacaaccctcttaaaccggatgagttctactcaccgatccttcagggctgttat
cccgatcccagcattaccagaaaagggaaagattattatctcgtgaactcctcattttca
atgttcccgggcgtcccgatttttacttctaaagatctggtgaactggaaacaggtaggg
catgtcctggacagaccttcacagcttaaagttgaaaaatcaggtgtttcgcacggaatt
tatgctccggacatcaaatacaataagcacaacgacactttttatatgatcactacccaa
tttgcgggaggtattggaaatatggtcgtaaaaacaaaagatccgtcaaaaggatggagc
gaagttcagaaactgaattttgacggtattgatcctgctattttctttgatgatgatgga
aaagcttacattgttcacaacgatgctccgccaaaagataccgagcagtataacggacac
cgcgttattaagatgtgggactacgatctcgaaaaagatcaggtagttccggattcggat
aagattattgtcaacggcggggtggatctttcccaaaaaccgatctggattgaaggtccg
catatttataagaaaaatggtaaatattatctgatgtgtgcagaaggaggaactggaggg
aatcacagcgaagttatttttatgtctgattccccgaaaggaccttacgttcctgctggc
aacaacccgattctgacacaacgttatttcccgaaagacagaaaagaaaaagtagactgg
gccggtcatgcagatcttgtggaaacaccggatggccagtattacggagtatttctggcg
atacgccccaacgagaaaaaccgtgttaacaaaggccgtgaaacattcatccttccggtt
gactggagtggaaaatatcctgttttccaaaatggactggttccgatgaaaccaaaattg
aaaatgccacaaggtgttcagaatcaaaccgggcaaaacggattttttcccaatggaaac
tttacctataacgacaaattaactgataaagatcttgatttccgatggattgcgatgcgc
ggaccgcgtgagaatttcatcacggtcacgaaaaatggcataaaagtgaatcctatggag
actaatatcaaatcgttggctccggtttcagcattattccacagattgcagcacgaagat
tttgaaacatcagtaacgctcgatttcaagcctaaatcagaaaaagaactggcaggaatt
acctgttatcaaagtgaaacattcaattatgttttcggaatcaccaaaaaggataaagat
ttctacattgtattggaaagaaccgaaaaaggagaatccaagttaattgcaagcgagaaa
atttcattatccaaaccagttaaactgcaggtggttgctgataaagatgaacatagtttt
aattattcgctggatggtaaaagctataaaaaccttggaggaccggtttcaggagatatt
ctttctactgatgtagcaggaggttttacaggaagccttattggtctgtacagtacctct
tccaatgatattgtgccacaatag
DBGET
integrated database retrieval system
