Chryseobacterium sp. StRB126: CHSO_3743
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Entry
CHSO_3743 CDS
T03602
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
chz
Chryseobacterium sp. StRB126
Pathway
chz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CHSO_3743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_3743
Enzymes [BR:
chz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CHSO_3743
DNA repair and recombination proteins [BR:
chz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CHSO_3743
Prokaryotic type
CHSO_3743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAP32780
LinkDB
All DBs
Position
complement(4269857..4270498)
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AA seq
213 aa
AA seq
DB search
MTWTEILAPIKSTEYFTTLWEKVKNEYATTKVFPPKNQIFRALEITAFEDVEVVIIGQDP
YHNDYQANGLCFSVSEQVTAPPSLKNIFIELKDDLGVVRTSKELDDWGKQGVLLLNATLT
VRAHSPNSHKDLGWETFTNYIIKEISDKKENVVFVLWGAFAQKKAELIDPAKHFILKSAH
PSPFSVYRGFFGSKPFSKINEYLISKGKEAISW
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgacctggacagaaattttagccccgataaaaagtacagaatattttacaaccctttgg
gaaaaagtaaaaaatgaatatgcaaccactaaggtttttcctccgaaaaatcaaattttc
agagccttggaaattacagcatttgaagatgttgaggtcgtgattattggtcaggatcct
tatcataacgattatcaggcgaatggtttgtgtttttccgtgtctgagcaggttacagca
ccaccatcccttaaaaatatttttatcgaattaaaagatgatcttggagttgtaagaaca
tccaaagaattagatgattgggggaagcaaggcgttcttttattgaatgcaacccttacg
gttcgtgcccattcaccaaattctcataaagatcttggttgggaaacatttaccaactac
attattaaggaaatttcagataaaaaagagaatgtggttttcgtattgtggggtgctttt
gcacagaaaaaagccgaacttatagatccggctaagcattttatattgaaatcggcacac
ccttcaccgttttccgtttatagaggattcttcggaagtaagcctttctcaaaaattaat
gaatatcttatttccaaagggaaggaggcgatttcttggtag
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