Chryseobacterium sp. StRB126: CHSO_3987
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Entry
CHSO_3987 CDS
T03602
Symbol
yliG
Name
(GenBank) MiaB family RNA modification enzyme
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
chz
Chryseobacterium sp. StRB126
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
chz03009
]
CHSO_3987 (yliG)
Enzymes [BR:
chz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
CHSO_3987 (yliG)
Ribosome biogenesis [BR:
chz03009
]
Prokaryotic type
ribosomal protein modification factors
CHSO_3987 (yliG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
DUF2670
Motif
Other DBs
NCBI-ProteinID:
BAP33024
UniProt:
A0A077KTT3
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All DBs
Position
complement(4540114..4541415)
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AA seq
433 aa
AA seq
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MRTKSVGKKKINVVTLGCSKNVYDSEVLMSQLKANGKEVVHEDRGDIVVINTCGFIDNAK
EESINTILDYVEAKNRGEVEKVFVTGCLSERYKPDLVKEIPDVDQYFGTRDLPMLLKHLG
ADYKHELVGERLTTTPKHYAYLKISEGCDRPCSFCAIPLMRGGHVSTPIEKLVSEAQKLT
KKGTKELILIAQDLTYYGLDIYKKRALGDLLKELVKVEGVEWIRLHYAFPSGFPEDVLDI
IREEPKVCNYIDIPLQHINSDLLKSMKRGTTHEKTDALLGKFREKVPDMAIRTTLIVGYP
GETEERFQELKDWVKEQKFDRLGCFTYSHEENTGAYVLEDDISQEVKEARVEEIMEVQSQ
ISWEKNQEKVGKVFRCIFDRKEGNYFVGRTEYDSPDVDNTVLVSAEDTYISIGEFADVKI
TSAEEFDLYGELL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaaaatcggtagggaagaaaaaaatcaatgtagttacacttggatgttccaaa
aatgtatatgactctgaagtattaatgagccagctgaaagccaatggaaaagaggtggtt
catgaagaccgtggagatattgttgttattaatacctgcggatttattgataatgctaaa
gaagagtctatcaataccattttagattatgtagaggctaaaaatagaggtgaagtagaa
aaagtattcgttacaggttgtctttccgaaagatacaaaccagacttggttaaagaaatt
ccagatgtagaccagtattttggtacaagagatcttcctatgttattaaagcatcttggt
gcagactataagcatgaattggtaggagagagattaactactactcctaaacattatgca
taccttaaaatttcagaaggatgtgacagaccatgttctttctgcgctattcctttgatg
agaggaggtcacgtttctactcctattgagaagttggtttctgaagctcagaaattgacc
aaaaaaggaaccaaagaattaattcttattgctcaggatctaacgtattatgggttggat
atttataaaaaacgagcattgggagatttgctgaaagagctagtaaaagtagaaggagtg
gagtggatccgtcttcattatgctttcccaagcggttttcctgaggatgttttggatatt
atccgtgaagaacctaaagtttgtaattatatagatattcctcttcagcacatcaattct
gatctgttgaaatcaatgaaaagaggaacaacccatgagaaaacagatgcacttttagga
aaattcagagaaaaagttcccgatatggcaatcagaacaaccctgattgtaggatatccg
ggtgaaactgaagaacgatttcaggaacttaaagactgggtaaaagagcagaaatttgac
agattaggatgctttacctattctcacgaggaaaataccggtgcttatgtattggaagat
gatatttcacaggaagtaaaagaagcaagggtagaagaaatcatggaagtgcagtctcag
atttcttgggaaaagaaccaggaaaaagtagggaaagtgttcagatgtatcttcgatcgt
aaagaagggaactattttgtcggaagaacagaatacgactctccggacgtagataataca
gttttggtatccgctgaagatacttatatttccatcggagaatttgcagacgtgaagatt
acttcagcagaagaattcgacttatacggtgaattattatag
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