Chryseobacterium sp. StRB126: CHSO_4082
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Entry
CHSO_4082 CDS
T03602
Symbol
hup
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
chz
Chryseobacterium sp. StRB126
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chz03032
]
CHSO_4082 (hup)
03036 Chromosome and associated proteins [BR:
chz03036
]
CHSO_4082 (hup)
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_4082 (hup)
DNA replication proteins [BR:
chz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CHSO_4082 (hup)
Chromosome and associated proteins [BR:
chz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CHSO_4082 (hup)
DNA repair and recombination proteins [BR:
chz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CHSO_4082 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
BAP33119
UniProt:
A0A077KTZ7
LinkDB
All DBs
Position
4639518..4639808
Genome browser
AA seq
96 aa
AA seq
DB search
MNKSELIDAIAKDAGITKVAAKAALESFIGNVTSTLKKKDGKVSLVGFGTFSVAERAARQ
GINPATKKPIKIAAKKVAKFKAGADLSNAVSGAKKK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtctgaattaatcgacgcaatcgcaaaagatgcaggtatcactaaagtggca
gcaaaagcagctttagaatctttcattggtaacgtaacttctactttaaagaaaaaagac
ggaaaagtttctttagtaggtttcggtactttctcagtagctgagagagcagctagacaa
gggatcaaccctgcaactaaaaaaccaatcaaaattgccgctaaaaaagttgctaagttc
aaggctggagctgatttatcaaatgcagtttctggtgctaagaaaaaataa
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