Chryseobacterium sp. StRB126: CHSO_4101
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Entry
CHSO_4101 CDS
T03602
Name
(GenBank) exonuclease RNAse t
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
chz
Chryseobacterium sp. StRB126
Pathway
chz03030
DNA replication
chz03430
Mismatch repair
chz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
chz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CHSO_4101
03430 Mismatch repair
CHSO_4101
03440 Homologous recombination
CHSO_4101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
chz03032
]
CHSO_4101
03400 DNA repair and recombination proteins [BR:
chz03400
]
CHSO_4101
Enzymes [BR:
chz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CHSO_4101
DNA replication proteins [BR:
chz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CHSO_4101
DNA repair and recombination proteins [BR:
chz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CHSO_4101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAP33138
LinkDB
All DBs
Position
4658731..4659495
Genome browser
AA seq
254 aa
AA seq
DB search
MNLKLHKPLCIFDLETTGTNIGKDRIVEICILKVNPDASRESKTWKINPEMAIPKESSEI
HGIYDEDVKDAPTFREIASKVMEMITGTDLGGFNSNRFDVPLLAEELLRVGMDFDLSKFK
LVDAQTIFHKKEPRNLGAAYQFYCGKTLENAHSAEADVMATFEVLDAQVGKYDDIPNEIA
QLSEFTFHNKNADLAGFIGYNDKQEEVFNFGKYKGQGVKAVFQKDLGYFGWLQNADFPLY
TKKVFTKIQLSSKF
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atgaacttaaaactccataaaccactttgtatttttgacctggaaactacaggaaccaac
atcggaaaagacagaattgttgaaatctgtatcttaaaagtaaatccggatgcctccaga
gaaagcaaaacctggaaaataaatcctgaaatggccattccaaaagaaagcagtgaaatt
cacggaatctacgatgaggatgtaaaagatgctcctaccttcagagaaattgcttctaag
gtgatggaaatgattaccggtacggatctgggaggttttaactccaacagatttgacgtt
cctcttttagctgaagagttattaagagtaggaatggattttgatcttagcaaattcaaa
ttggtagatgcacagactattttccataaaaaagaacctagaaatttaggagcagcttat
cagttttactgcggaaaaacattagaaaacgcacactctgcagaagctgatgtaatggca
accttcgaagttctggacgctcaggtaggaaaatatgatgatattccgaatgaaattgcc
caattaagcgaattcaccttccataataagaatgctgatcttgccggatttatcggatat
aatgataagcaggaagaagtattcaacttcggaaagtataaaggacaaggtgtaaaagct
gttttccagaaggaccttgggtatttcggatggcttcagaatgctgattttccgttgtat
acaaaaaaagtatttactaaaatccaattgtcaagcaaattttaa
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